38 items (Ooceraea biroi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DMN91_011269	Small ubiquitin-related modifier. (92 aa)
	X777_00164	Uncharacterized protein. (267 aa)
	DMN91_004844	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (321 aa)
	DMN91_012466	DNA excision repair protein ERCC-1. (262 aa)
	DMN91_001357	Polyubiquitin-A. (458 aa)
	X777_12654	Uncharacterized protein. (468 aa)
	X777_12165	Uncharacterized protein. (116 aa)
	DMN91_011437	RING-box protein 1A. (113 aa)
	X777_12652	SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
	X777_11156	TFIIH basal transcription factor complex helicase XPD subunit. (756 aa)
	X777_10816	Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (338 aa)
	X777_09468	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (554 aa)
	DMN91_004401	General transcription factor IIH subunit. (559 aa)
	X777_09005	Cyclin-H; Belongs to the cyclin family. (494 aa)
	DMN91_005168	DNA damage-binding protein. (1137 aa)
	DMN91_004902	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
	X777_05345	DNA excision repair protein haywire. (794 aa)
	X777_04482	Uncharacterized protein. (408 aa)
	DMN91_001351	Gamma-glutamylcyclotransferase. (176 aa)
	DMN91_009840	UV excision repair protein RAD23-like protein B. (375 aa)
	DMN91_000821	Replication protein A 32 kDa subunit. (244 aa)
	X777_02753	Small ubiquitin-related modifier. (59 aa)
	X777_03466	DNA repair endonuclease XPF. (877 aa)
	X777_02313	Uncharacterized protein. (295 aa)
	X777_03168	Poly [ADP-ribose] polymerase. (986 aa)
	X777_01765	General transcription factor IIH subunit. (58 aa)
	X777_02600	KxDL domain-containing protein. (201 aa)
	X777_01238	Polyubiquitin-A. (839 aa)
	X777_16864	DNA repair protein complementing XP-G cells. (1125 aa)
	X777_14741	DNA repair protein complementing XP-C cells-like protein. (859 aa)
	DMN91_011087	Uncharacterized protein. (230 aa)
	DMN91_009557	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	X777_08199	Cullin-4B; Belongs to the cullin family. (857 aa)
	DMN91_008246	E3 SUMO-protein ligase PIAS3. (569 aa)
	DMN91_006226	General transcription factor IIH subunit. (401 aa)
	X777_10136	General transcription factor IIH subunit. (294 aa)
	DMN91_002614	Ubiquitin-60S ribosomal protein L40. (128 aa)
	DMN91_012657	DNA repair protein complementing XP-A cells-like protein. (276 aa)

Your Current Organism:

Ooceraea biroi

NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMN91_000821	DMN91_001357	A0A026WKZ8	A0A026VWK9	Replication protein A 32 kDa subunit.	Polyubiquitin-A.	0.424
DMN91_000821	DMN91_002614	A0A026WKZ8	A0A026X3M9	Replication protein A 32 kDa subunit.	Ubiquitin-60S ribosomal protein L40.	0.497
DMN91_000821	DMN91_004401	A0A026WKZ8	A0A026W810	Replication protein A 32 kDa subunit.	General transcription factor IIH subunit.	0.479
DMN91_000821	DMN91_006226	A0A026WKZ8	A0A026X2R0	Replication protein A 32 kDa subunit.	General transcription factor IIH subunit.	0.587
DMN91_000821	DMN91_009557	A0A026WKZ8	A0A026WXK5	Replication protein A 32 kDa subunit.	Ubiquitin-40S ribosomal protein S27a.	0.498
DMN91_000821	DMN91_009840	A0A026WKZ8	A0A026WK35	Replication protein A 32 kDa subunit.	UV excision repair protein RAD23-like protein B.	0.409
DMN91_000821	DMN91_011087	A0A026WKZ8	A0A026WU90	Replication protein A 32 kDa subunit.	Uncharacterized protein.	0.405
DMN91_000821	DMN91_011437	A0A026WKZ8	A0A026W1Q9	Replication protein A 32 kDa subunit.	RING-box protein 1A.	0.527
DMN91_000821	DMN91_012466	A0A026WKZ8	A0A026VW34	Replication protein A 32 kDa subunit.	DNA excision repair protein ERCC-1.	0.634
DMN91_000821	DMN91_012657	A0A026WKZ8	A0A026W574	Replication protein A 32 kDa subunit.	DNA repair protein complementing XP-A cells-like protein.	0.795
DMN91_000821	X777_01238	A0A026WKZ8	A0A026WRG4	Replication protein A 32 kDa subunit.	Polyubiquitin-A.	0.424
DMN91_000821	X777_03168	A0A026WKZ8	A0A026WPG3	Replication protein A 32 kDa subunit.	Poly [ADP-ribose] polymerase.	0.572
DMN91_000821	X777_03466	A0A026WKZ8	A0A026WM20	Replication protein A 32 kDa subunit.	DNA repair endonuclease XPF.	0.729
DMN91_000821	X777_04482	A0A026WKZ8	A0A026WGC1	Replication protein A 32 kDa subunit.	Uncharacterized protein.	0.834
DMN91_000821	X777_05345	A0A026WKZ8	A0A026WFU6	Replication protein A 32 kDa subunit.	DNA excision repair protein haywire.	0.472
DMN91_000821	X777_09468	A0A026WKZ8	A0A026W6H6	Replication protein A 32 kDa subunit.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.970
DMN91_000821	X777_10136	A0A026WKZ8	A0A026X3B4	Replication protein A 32 kDa subunit.	General transcription factor IIH subunit.	0.501
DMN91_000821	X777_11156	A0A026WKZ8	A0A026W2N3	Replication protein A 32 kDa subunit.	TFIIH basal transcription factor complex helicase XPD subunit.	0.584
DMN91_000821	X777_12165	A0A026WKZ8	A0A026W0N1	Replication protein A 32 kDa subunit.	Uncharacterized protein.	0.996
DMN91_000821	X777_14741	A0A026WKZ8	A0A026WTZ4	Replication protein A 32 kDa subunit.	DNA repair protein complementing XP-C cells-like protein.	0.607