STRINGSTRING
X777_00232 X777_00232 X777_00164 X777_00164 X777_00092 X777_00092 DMN91_004145 DMN91_004145 X777_01046 X777_01046 DMN91_004368 DMN91_004368 X777_15570 X777_15570 X777_15478 X777_15478 DMN91_004844 DMN91_004844 DMN91_012466 DMN91_012466 X777_14446 X777_14446 DMN91_001357 DMN91_001357 X777_15640 X777_15640 DMN91_010015 DMN91_010015 X777_12165 X777_12165 X777_11764 X777_11764 X777_11411 X777_11411 DMN91_011437 DMN91_011437 X777_11156 X777_11156 DMN91_000771 DMN91_000771 X777_10866 X777_10866 X777_11417 X777_11417 X777_11703 X777_11703 X777_10361 X777_10361 X777_09882 X777_09882 X777_10816 X777_10816 DMN91_012657 DMN91_012657 X777_09988 X777_09988 X777_09468 X777_09468 DMN91_004401 DMN91_004401 X777_09005 X777_09005 X777_09843 X777_09843 DMN91_009378 DMN91_009378 X777_09254 X777_09254 DMN91_005350 DMN91_005350 DMN91_005168 DMN91_005168 X777_06484 X777_06484 X777_06539 X777_06539 DMN91_004666 DMN91_004666 DMN91_004902 DMN91_004902 DMN91_007313 DMN91_007313 X777_05345 X777_05345 X777_06622 X777_06622 X777_04521 X777_04521 X777_04482 X777_04482 DMN91_001351 DMN91_001351 DMN91_000031 DMN91_000031 DMN91_001691 DMN91_001691 DMN91_009376 DMN91_009376 X777_03583 X777_03583 X777_03616 X777_03616 DMN91_010041 DMN91_010041 X777_03582 X777_03582 DMN91_000821 DMN91_000821 X777_02666 X777_02666 X777_03604 X777_03604 X777_03466 X777_03466 X777_02752 X777_02752 X777_02313 X777_02313 X777_02665 X777_02665 X777_02459 X777_02459 X777_01765 X777_01765 X777_01564 X777_01564 X777_01894 X777_01894 X777_02600 X777_02600 X777_01238 X777_01238 X777_16864 X777_16864 DMN91_008090 DMN91_008090 DMN91_010950 DMN91_010950 X777_13556 X777_13556 DMN91_010284 DMN91_010284 X777_13477 X777_13477 DMN91_009557 DMN91_009557 X777_08199 X777_08199 DMN91_004582 DMN91_004582 DMN91_006226 DMN91_006226 X777_10136 X777_10136 DMN91_002614 DMN91_002614 X777_07539 X777_07539 X777_04633 X777_04633
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
X777_00232DNA-directed RNA polymerase II 16 kDa polypeptide. (140 aa)
X777_00164Uncharacterized protein. (267 aa)
X777_00092Uncharacterized protein. (140 aa)
DMN91_004145Uncharacterized protein. (982 aa)
X777_01046Pre-mRNA-processing factor. (459 aa)
DMN91_004368DNA polymerase epsilon subunit. (130 aa)
X777_15570Pre-mRNA-splicing factor SYF1. (753 aa)
X777_15478X-linked retinitis pigmentosa GTPase regulator-like protein. (1721 aa)
DMN91_004844CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (321 aa)
DMN91_012466DNA excision repair protein ERCC-1. (262 aa)
X777_14446Uncharacterized protein. (316 aa)
DMN91_001357Polyubiquitin-A. (458 aa)
X777_15640DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1129 aa)
DMN91_010015Replication factor C subunit. (328 aa)
X777_12165Uncharacterized protein. (116 aa)
X777_11764DNA-directed RNA polymerase II subunit RPB9. (67 aa)
X777_11411Protein cbp-1. (2519 aa)
DMN91_011437RING-box protein 1A. (113 aa)
X777_11156TFIIH basal transcription factor complex helicase XPD subunit. (756 aa)
DMN91_000771DNA-directed RNA polymerases I, II, and III subunit RPABC2. (130 aa)
X777_10866DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1139 aa)
X777_11417Histone acetyltransferase. (86 aa)
X777_11703DNA-directed RNA polymerase II subunit RPB7. (293 aa)
X777_10361DNA polymerase delta subunit. (410 aa)
X777_09882DNA-directed RNA polymerases I, II, and III subunit RPABC3. (167 aa)
X777_10816Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (338 aa)
DMN91_012657DNA repair protein complementing XP-A cells-like protein. (276 aa)
X777_09988Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (227 aa)
X777_09468Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (554 aa)
DMN91_004401General transcription factor IIH subunit. (559 aa)
X777_09005Cyclin-H; Belongs to the cyclin family. (494 aa)
X777_09843DNA excision repair protein ERCC-6. (1073 aa)
DMN91_009378Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
X777_09254Intron-binding protein aquarius. (1446 aa)
DMN91_005350DNA polymerase epsilon subunit. (123 aa)
DMN91_005168DNA damage-binding protein. (1137 aa)
X777_06484zf-C2H2_jaz domain-containing protein. (305 aa)
X777_06539DUF2236 domain-containing protein. (284 aa)
DMN91_004666DNA-directed RNA polymerase II subunit RPB11. (117 aa)
DMN91_004902General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
DMN91_007313RCC1 and BTB domain-containing protein. (547 aa)
X777_05345DNA excision repair protein haywire. (794 aa)
X777_06622DNA-directed RNA polymerase II subunit RPB9. (52 aa)
X777_04521Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (1112 aa)
X777_04482Uncharacterized protein. (408 aa)
DMN91_001351Gamma-glutamylcyclotransferase. (176 aa)
DMN91_000031Replication factor C subunit. (354 aa)
DMN91_001691Transcription elongation factor S-II. (312 aa)
DMN91_009376ATPase family AAA domain-containing protein. (1158 aa)
X777_03583DUF2236 domain-containing protein. (264 aa)
X777_03616Death-inducer obliterator. (2259 aa)
DMN91_010041Replication factor C subunit. (352 aa)
X777_03582DUF2236 domain-containing protein. (338 aa)
DMN91_000821Replication protein A 32 kDa subunit. (244 aa)
X777_02666Uncharacterized protein. (246 aa)
X777_03604RCC1 and BTB domain-containing protein. (487 aa)
X777_03466DNA repair endonuclease XPF. (877 aa)
X777_02752DUF2236 domain-containing protein. (379 aa)
X777_02313Uncharacterized protein. (295 aa)
X777_02665DUF2236 domain-containing protein. (388 aa)
X777_02459DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
X777_01765General transcription factor IIH subunit. (58 aa)
X777_01564DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2241 aa)
X777_01894RCC1 and BTB domain-containing protein. (505 aa)
X777_02600KxDL domain-containing protein. (201 aa)
X777_01238Polyubiquitin-A. (839 aa)
X777_16864DNA repair protein complementing XP-G cells. (1125 aa)
DMN91_008090DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
DMN91_010950DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (534 aa)
X777_13556Pre-mRNA-splicing factor ISY1-like protein. (235 aa)
DMN91_010284DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
X777_13477DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1901 aa)
DMN91_009557Ubiquitin-40S ribosomal protein S27a. (156 aa)
X777_08199Cullin-4B; Belongs to the cullin family. (857 aa)
DMN91_004582DNA-directed RNA polymerase II subunit RPB3. (276 aa)
DMN91_006226General transcription factor IIH subunit. (401 aa)
X777_10136General transcription factor IIH subunit. (294 aa)
DMN91_002614Ubiquitin-60S ribosomal protein L40. (128 aa)
X777_07539Replication factor C subunit. (359 aa)
X777_04633Replication factor C subunit 1. (1039 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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