STRINGSTRING
DMN91_004666 DMN91_004666 X777_06585 X777_06585 DMN91_007010 DMN91_007010 X777_05143 X777_05143 X777_06622 X777_06622 X777_15624 X777_15624 X777_04559 X777_04559 X777_03607 X777_03607 X777_03583 X777_03583 DMN91_000682 DMN91_000682 DMN91_009993 DMN91_009993 DMN91_010283 DMN91_010283 X777_03582 X777_03582 X777_02666 X777_02666 DMN91_010220 DMN91_010220 X777_02752 X777_02752 X777_02665 X777_02665 X777_02459 X777_02459 DMN91_006553 DMN91_006553 X777_00232 X777_00232 X777_04415 X777_04415 X777_15629 X777_15629 DMN91_012341 DMN91_012341 X777_14446 X777_14446 X777_15640 X777_15640 DMN91_003897 DMN91_003897 DMN91_001910 DMN91_001910 X777_11764 X777_11764 X777_12892 X777_12892 X777_11411 X777_11411 X777_10616 X777_10616 DMN91_006481 DMN91_006481 DMN91_000771 DMN91_000771 X777_10866 X777_10866 X777_11417 X777_11417 X777_11703 X777_11703 DMN91_006318 DMN91_006318 X777_09882 X777_09882 DMN91_000752 DMN91_000752 X777_09703 X777_09703 X777_14784 X777_14784 X777_01258 X777_01258 DMN91_008484 DMN91_008484 DMN91_008090 DMN91_008090 DMN91_010520 DMN91_010520 X777_00380 X777_00380 DMN91_008483 DMN91_008483 X777_13341 X777_13341 DMN91_010284 DMN91_010284 X777_13477 X777_13477 X777_14003 X777_14003 DMN91_004582 DMN91_004582 X777_07778 X777_07778 X777_07858 X777_07858 X777_07863 X777_07863 DMN91_004814 DMN91_004814 DMN91_004067 DMN91_004067 X777_07859 X777_07859 X777_09337 X777_09337 X777_00618 X777_00618 X777_00620 X777_00620 X777_03396 X777_03396 X777_10200 X777_10200 X777_03421 X777_03421 X777_08873 X777_08873 X777_06412 X777_06412 X777_06539 X777_06539
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DMN91_004666DNA-directed RNA polymerase II subunit RPB11. (117 aa)
X777_06585GATA-binding factor C. (183 aa)
DMN91_007010Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (706 aa)
X777_05143Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1757 aa)
X777_06622DNA-directed RNA polymerase II subunit RPB9. (52 aa)
X777_15624Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (453 aa)
X777_04559Uncharacterized protein. (100 aa)
X777_03607Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (357 aa)
X777_03583DUF2236 domain-containing protein. (264 aa)
DMN91_000682Peptidylprolyl isomerase. (460 aa)
DMN91_009993TATA box-binding protein-like protein. (295 aa)
DMN91_010283Receptor-binding cancer antigen expressed on SiSo cells. (205 aa)
X777_03582DUF2236 domain-containing protein. (338 aa)
X777_02666Uncharacterized protein. (246 aa)
DMN91_010220General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (272 aa)
X777_02752DUF2236 domain-containing protein. (379 aa)
X777_02665DUF2236 domain-containing protein. (388 aa)
X777_02459DNA-directed RNA polymerases I, II, and III subunit RPABC4. (57 aa)
DMN91_006553GATA-binding factor A. (406 aa)
X777_00232DNA-directed RNA polymerase II 16 kDa polypeptide. (140 aa)
X777_04415Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (517 aa)
X777_15629Uncharacterized protein. (132 aa)
DMN91_012341Upstream stimulatory factor. (265 aa)
X777_14446Uncharacterized protein. (316 aa)
X777_15640DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1129 aa)
DMN91_003897KN motif and ankyrin repeat domain-containing protein. (1073 aa)
DMN91_001910Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
X777_11764DNA-directed RNA polymerase II subunit RPB9. (67 aa)
X777_12892Nuclear receptor coactivator. (1401 aa)
X777_11411Protein cbp-1. (2519 aa)
X777_10616CXXC-type zinc finger protein. (382 aa)
DMN91_006481Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (112 aa)
DMN91_000771DNA-directed RNA polymerases I, II, and III subunit RPABC2. (130 aa)
X777_10866DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1139 aa)
X777_11417Histone acetyltransferase. (86 aa)
X777_11703DNA-directed RNA polymerase II subunit RPB7. (293 aa)
DMN91_006318Heat shock protein HSP 90-alpha. (722 aa)
X777_09882DNA-directed RNA polymerases I, II, and III subunit RPABC3. (167 aa)
DMN91_000752TATA-box-binding protein. (241 aa)
X777_09703Transcription initiation factor IIA subunit. (355 aa)
X777_14784Protein fork head. (425 aa)
X777_01258Transcription factor GATA-4. (908 aa)
DMN91_008484Histone acetyltransferase KAT2A. (818 aa)
DMN91_008090DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
DMN91_010520TATA-box-binding protein. (306 aa)
X777_00380Protein big brother. (256 aa)
DMN91_008483Histone acetyltransferase KAT2A. (815 aa)
X777_13341Steroid hormone receptor ERR2. (432 aa)
DMN91_010284DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
X777_13477DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1901 aa)
X777_14003Receptor protein-tyrosine kinase. (1316 aa)
DMN91_004582DNA-directed RNA polymerase II subunit RPB3. (276 aa)
X777_07778GATA-binding factor A. (591 aa)
X777_07858Protein lozenge. (702 aa)
X777_07863Protein lozenge. (307 aa)
DMN91_004814Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (381 aa)
DMN91_004067Segmentation protein Runt. (359 aa)
X777_07859Protein lozenge. (497 aa)
X777_09337Cyclin-T; Belongs to the cyclin family. (1472 aa)
X777_00618Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (540 aa)
X777_00620Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (546 aa)
X777_03396Histone-arginine methyltransferase CARMER; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (596 aa)
X777_10200Uncharacterized protein. (316 aa)
X777_03421Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (550 aa)
X777_08873Upstream stimulatory factor. (241 aa)
X777_06412Prostaglandin E synthase. (166 aa)
X777_06539DUF2236 domain-containing protein. (284 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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