STRINGSTRING
SFG13700.1 SFG13700.1 SFF63188.1 SFF63188.1 SFF71822.1 SFF71822.1 SFF69882.1 SFF69882.1 menG menG SFF75440.1 SFF75440.1 ubiX ubiX mqnA mqnA SFF84828.1 SFF84828.1 SFF84943.1 SFF84943.1 SFF85243.1 SFF85243.1 mqnC mqnC SFF91498.1 SFF91498.1 SFF90199.1 SFF90199.1 mqnD mqnD mqnB mqnB SFF94404.1 SFF94404.1 SFF96797.1 SFF96797.1 SFF96864.1 SFF96864.1 SFG00867.1 SFG00867.1 SFG02011.1 SFG02011.1 mqnE mqnE SFG07737.1 SFG07737.1 SFG07762.1 SFG07762.1 SFG11715.1 SFG11715.1 SFG15683.1 SFG15683.1 SFG15183.1 SFG15183.1 SFG17077.1 SFG17077.1 SFG22111.1 SFG22111.1 SFG28462.1 SFG28462.1 SFG37125.1 SFG37125.1 SFG39952.1 SFG39952.1 SFG40743.1 SFG40743.1 SFG41668.1 SFG41668.1 SFG42827.1 SFG42827.1 SFG45034.1 SFG45034.1 SFG54899.1 SFG54899.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFG13700.1DNA-binding transcriptional regulator, MarR family. (105 aa)
SFF63188.1Hypothetical protein. (255 aa)
SFF71822.1Thioesterase-3. (130 aa)
SFF69882.1DNA-binding transcriptional regulator, ArsR family. (327 aa)
menGDemethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (250 aa)
SFF75440.14-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. (293 aa)
ubiX4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (197 aa)
mqnAChorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). (280 aa)
SFF84828.1Helix-turn-helix domain-containing protein. (201 aa)
SFF84943.1Cadmium-sensing regulator, CadC. (125 aa)
SFF85243.1Methyltransferase domain-containing protein. (204 aa)
mqnCDe-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). (369 aa)
SFF91498.1acyl-CoA thioester hydrolase. (136 aa)
SFF90199.1NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family. (202 aa)
mqnD1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. (276 aa)
mqnBFutalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). (223 aa)
SFF94404.1NADH dehydrogenase. (322 aa)
SFF96797.1Hypothetical protein. (250 aa)
SFF96864.1Hypothetical protein. (273 aa)
SFG00867.1fatty-acyl-CoA synthase. (497 aa)
SFG02011.1Methyltransferase domain-containing protein. (253 aa)
mqnEAminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. (365 aa)
SFG07737.1Ubiquinone/menaquinone biosynthesis C-methylase UbiE. (270 aa)
SFG07762.1Transcriptional regulator, ArsR family. (114 aa)
SFG11715.1DNA-binding transcriptional regulator, ArsR family. (110 aa)
SFG15683.1Muconate cycloisomerase. (374 aa)
SFG15183.1acyl-CoA thioester hydrolase. (154 aa)
SFG17077.1Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (506 aa)
SFG22111.1DNA-binding transcriptional regulator, ArsR family. (107 aa)
SFG28462.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (214 aa)
SFG37125.1Transcriptional regulator, ArsR family. (102 aa)
SFG39952.1Methyltransferase domain-containing protein. (123 aa)
SFG40743.1Methyltransferase domain-containing protein. (256 aa)
SFG41668.1Antimicrobial peptide system protein, SdpB family. (459 aa)
SFG42827.1Hypothetical protein. (228 aa)
SFG45034.1Multimeric flavodoxin WrbA. (186 aa)
SFG54899.1Ubiquinone/menaquinone biosynthesis C-methylase UbiE. (251 aa)
Your Current Organism:
Planifilum fulgidum
NCBI taxonomy Id: 201973
Other names: ATCC BAA-970, DSM 44945, JCM 12508, P. fulgidum, Planifilum fulgidum Hatayama et al. 2005, Planifilum fulgidus, Thermoactinomyces sp. 500275, Thermoactinomyces sp. 700375, Thermoactinomyces sp. C0170, strain 500275
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