(5 nodes) Oligopeptide/dipeptide ABC transporter, C-terminal, and Peptide transmembrane transporter activity network (Rhizobium sp. CIAT894)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	oppA	Oligopeptide ABC transporter substrate-binding protein OppA. (526 aa)
	oppB	Oligopeptide ABC transporter permease protein OppB. (307 aa)
	oppC	Oligopeptide ABC transporter permease protein OppC. (305 aa)
	oppD	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (333 aa)
	oppF	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (328 aa)

Your Current Organism:

Rhizobium sp. CIAT894

NCBI taxonomy Id: 2020312
Other names: R. sp. CIAT894

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
oppA	oppB	RHEC894_CH03171	RHEC894_CH03172	Oligopeptide ABC transporter substrate-binding protein OppA.	Oligopeptide ABC transporter permease protein OppB.	0.982
oppA	oppC	RHEC894_CH03171	RHEC894_CH03173	Oligopeptide ABC transporter substrate-binding protein OppA.	Oligopeptide ABC transporter permease protein OppC.	0.979
oppA	oppD	RHEC894_CH03171	RHEC894_CH03174	Oligopeptide ABC transporter substrate-binding protein OppA.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.938
oppA	oppF	RHEC894_CH03171	RHEC894_CH03175	Oligopeptide ABC transporter substrate-binding protein OppA.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.967
oppB	oppA	RHEC894_CH03172	RHEC894_CH03171	Oligopeptide ABC transporter permease protein OppB.	Oligopeptide ABC transporter substrate-binding protein OppA.	0.982
oppB	oppC	RHEC894_CH03172	RHEC894_CH03173	Oligopeptide ABC transporter permease protein OppB.	Oligopeptide ABC transporter permease protein OppC.	0.992
oppB	oppD	RHEC894_CH03172	RHEC894_CH03174	Oligopeptide ABC transporter permease protein OppB.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.983
oppB	oppF	RHEC894_CH03172	RHEC894_CH03175	Oligopeptide ABC transporter permease protein OppB.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.991
oppC	oppA	RHEC894_CH03173	RHEC894_CH03171	Oligopeptide ABC transporter permease protein OppC.	Oligopeptide ABC transporter substrate-binding protein OppA.	0.979
oppC	oppB	RHEC894_CH03173	RHEC894_CH03172	Oligopeptide ABC transporter permease protein OppC.	Oligopeptide ABC transporter permease protein OppB.	0.992
oppC	oppD	RHEC894_CH03173	RHEC894_CH03174	Oligopeptide ABC transporter permease protein OppC.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.990
oppC	oppF	RHEC894_CH03173	RHEC894_CH03175	Oligopeptide ABC transporter permease protein OppC.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.993
oppD	oppA	RHEC894_CH03174	RHEC894_CH03171	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter substrate-binding protein OppA.	0.938
oppD	oppB	RHEC894_CH03174	RHEC894_CH03172	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppB.	0.983
oppD	oppC	RHEC894_CH03174	RHEC894_CH03173	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppC.	0.990
oppD	oppF	RHEC894_CH03174	RHEC894_CH03175	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.923
oppF	oppA	RHEC894_CH03175	RHEC894_CH03171	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter substrate-binding protein OppA.	0.967
oppF	oppB	RHEC894_CH03175	RHEC894_CH03172	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppB.	0.991
oppF	oppC	RHEC894_CH03175	RHEC894_CH03173	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter permease protein OppC.	0.993
oppF	oppD	RHEC894_CH03175	RHEC894_CH03174	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.923