(49 nodes) Channel activity network (Rhizobium sp. CIAT894)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	aapJ	General L-amino acid ABC transporter substrate-binding protein AapJ; Belongs to the bacterial solute-binding protein 3 family. (341 aa)
	RHEC894_CH00786	WbqC-like family protein. (233 aa)
	RHEC894_CH00824	Outer membrane protein. (224 aa)
	atpB	ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (250 aa)
	atpE	ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (75 aa)
	atpF1	ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (207 aa)
	atpF	ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (164 aa)
	RHEC894_CH01088	WbqC-like family protein. (236 aa)
	RHEC894_CH01111	Voltage-gated chloride channel protein. (441 aa)
	ropA-1	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (340 aa)
	mscS	Small-conductance mechanosensitive channel. (298 aa)
	RHEC894_CH01436	Amino acid ABC transporter substrate-binding protein. (276 aa)
	ropB	Outer membrane protein RopB. (211 aa)
	cya-2	Adenylate cyclase 2. (353 aa)
	RHEC894_CH01886	Long-chain fatty acid transporter protein. (420 aa)
	RHEC894_CH02040	Uncharacterized protein. (249 aa)
	RHEC894_CH02041	Uncharacterized protein. (494 aa)
	RHEC894_CH02048	Amino acid ABC transporter substrate-binding protein. (343 aa)
	RHEC894_CH02185	Mechanosensitive ion channel MscS protein. (716 aa)
	RHEC894_CH02414	Uncharacterized protein. (176 aa)
	RHEC894_CH02464	OmpA/MotB family outer membrane protein. (758 aa)
	RHEC894_CH02465	Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (257 aa)
	ropA-2	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (340 aa)
	RHEC894_CH02543	Voltage-gated chloride channel protein. (596 aa)
	RHEC894_CH02571	Mechanosensitive ion channel MscS protein. (843 aa)
	RHEC894_CH02821	Mechanosensitive ion channel MscS protein. (493 aa)
	tcyA	L-cystine ABC transporter substrate-binding protein TcyA; Belongs to the bacterial solute-binding protein 3 family. (257 aa)
	RHEC894_CH04224	Gly-zipper_Omp domain-containing protein. (86 aa)
	amtB	Ammonium transporter. (474 aa)
	RHEC894_CH04156	ABC transporter substrate-binding protein. (265 aa)
	atpH	ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (188 aa)
	atpA	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (509 aa)
	atpG	ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (294 aa)
	atpD	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (476 aa)
	atpC	ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. (135 aa)
	RHEC894_CH04036	Gly-zipper_YMGG domain-containing protein. (85 aa)
	RHEC894_CH03986	DMT superfamily inner membrane transporter protein. (295 aa)
	RHEC894_CH03908	Mechanosensitive ion channel MscS protein. (640 aa)
	RHEC894_CH03740	Adenylate/guanylate cyclase protein. (529 aa)
	ropA-3	Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (347 aa)
	RHEC894_CH03606	Mechanosensitive ion channel MscS protein. (702 aa)
	RHEC894_CH03571	Outer membrane protein. (278 aa)
	RHEC894_CH03099	ABC transporter substrate-binding protein. (237 aa)
	RHEC894_CH02861	OmpA/MotB family outer membrane protein. (221 aa)
	RHEC894_CH00568	ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (291 aa)
	mscL	Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (145 aa)
	motA	Motility protein MotA. (290 aa)
	fliI	Flagellum-specific ATP synthase. (465 aa)
	motB	Flagellar motor protein MotB. (460 aa)

Your Current Organism:

Rhizobium sp. CIAT894

NCBI taxonomy Id: 2020312
Other names: R. sp. CIAT894

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RHEC894_CH00568	RHEC894_CH01436	RHEC894_CH00568	RHEC894_CH01436	ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.	Amino acid ABC transporter substrate-binding protein.	0.738
RHEC894_CH00786	RHEC894_CH02543	RHEC894_CH00786	RHEC894_CH02543	WbqC-like family protein.	Voltage-gated chloride channel protein.	0.419
RHEC894_CH00786	atpA	RHEC894_CH00786	RHEC894_CH04064	WbqC-like family protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	0.996
RHEC894_CH00786	atpB	RHEC894_CH00786	RHEC894_CH00874	WbqC-like family protein.	ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.	0.995
RHEC894_CH00786	atpC	RHEC894_CH00786	RHEC894_CH04060	WbqC-like family protein.	ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.996
RHEC894_CH00786	atpD	RHEC894_CH00786	RHEC894_CH04062	WbqC-like family protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.	0.996
RHEC894_CH00786	atpE	RHEC894_CH00786	RHEC894_CH00875	WbqC-like family protein.	ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.996
RHEC894_CH00786	atpF	RHEC894_CH00786	RHEC894_CH00877	WbqC-like family protein.	ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.980
RHEC894_CH00786	atpF1	RHEC894_CH00786	RHEC894_CH00876	WbqC-like family protein.	ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.980
RHEC894_CH00786	atpH	RHEC894_CH00786	RHEC894_CH04065	WbqC-like family protein.	ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.996
RHEC894_CH00824	RHEC894_CH02464	RHEC894_CH00824	RHEC894_CH02464	Outer membrane protein.	OmpA/MotB family outer membrane protein.	0.440
RHEC894_CH01088	RHEC894_CH02543	RHEC894_CH01088	RHEC894_CH02543	WbqC-like family protein.	Voltage-gated chloride channel protein.	0.419
RHEC894_CH01088	atpA	RHEC894_CH01088	RHEC894_CH04064	WbqC-like family protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	0.996
RHEC894_CH01088	atpB	RHEC894_CH01088	RHEC894_CH00874	WbqC-like family protein.	ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.	0.995
RHEC894_CH01088	atpC	RHEC894_CH01088	RHEC894_CH04060	WbqC-like family protein.	ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.996
RHEC894_CH01088	atpD	RHEC894_CH01088	RHEC894_CH04062	WbqC-like family protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.	0.996
RHEC894_CH01088	atpE	RHEC894_CH01088	RHEC894_CH00875	WbqC-like family protein.	ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.996
RHEC894_CH01088	atpF	RHEC894_CH01088	RHEC894_CH00877	WbqC-like family protein.	ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.980
RHEC894_CH01088	atpF1	RHEC894_CH01088	RHEC894_CH00876	WbqC-like family protein.	ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.	0.980
RHEC894_CH01088	atpH	RHEC894_CH01088	RHEC894_CH04065	WbqC-like family protein.	ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.	0.996