(8 nodes) Peptide transport network (Rhizobium sp. CIAT894)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RHEC894_CH00207	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (545 aa)
	dppF	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (317 aa)
	RHEC894_CH02104	Dipeptide ABC transporter ATP-binding protein. (281 aa)
	oppD	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (333 aa)
	oppF	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (328 aa)
	bacA	ABC transporter membrane protein SbmA/BacA. (421 aa)
	RHEC894_CH04253	Dipeptide ABC transporter ATP-binding protein. (277 aa)
	dppD	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily. (338 aa)

Your Current Organism:

Rhizobium sp. CIAT894

NCBI taxonomy Id: 2020312
Other names: R. sp. CIAT894

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RHEC894_CH00207	RHEC894_CH02104	RHEC894_CH00207	RHEC894_CH02104	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein.	0.554
RHEC894_CH00207	RHEC894_CH04253	RHEC894_CH00207	RHEC894_CH04253	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein.	0.558
RHEC894_CH00207	dppD	RHEC894_CH00207	RHEC894_CH00763	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	0.552
RHEC894_CH00207	dppF	RHEC894_CH00207	RHEC894_CH00764	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	0.736
RHEC894_CH00207	oppD	RHEC894_CH00207	RHEC894_CH03174	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.553
RHEC894_CH00207	oppF	RHEC894_CH00207	RHEC894_CH03175	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.588
RHEC894_CH02104	RHEC894_CH00207	RHEC894_CH02104	RHEC894_CH00207	Dipeptide ABC transporter ATP-binding protein.	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.554
RHEC894_CH02104	dppF	RHEC894_CH02104	RHEC894_CH00764	Dipeptide ABC transporter ATP-binding protein.	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	0.836
RHEC894_CH02104	oppF	RHEC894_CH02104	RHEC894_CH03175	Dipeptide ABC transporter ATP-binding protein.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.583
RHEC894_CH04253	RHEC894_CH00207	RHEC894_CH04253	RHEC894_CH00207	Dipeptide ABC transporter ATP-binding protein.	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.558
RHEC894_CH04253	dppF	RHEC894_CH04253	RHEC894_CH00764	Dipeptide ABC transporter ATP-binding protein.	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	0.836
RHEC894_CH04253	oppF	RHEC894_CH04253	RHEC894_CH03175	Dipeptide ABC transporter ATP-binding protein.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.588
dppD	RHEC894_CH00207	RHEC894_CH00763	RHEC894_CH00207	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.552
dppD	dppF	RHEC894_CH00763	RHEC894_CH00764	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	0.969
dppD	oppF	RHEC894_CH00763	RHEC894_CH03175	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppF; Belongs to the ABC transporter superfamily.	0.685
dppF	RHEC894_CH00207	RHEC894_CH00764	RHEC894_CH00207	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.736
dppF	RHEC894_CH02104	RHEC894_CH00764	RHEC894_CH02104	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein.	0.836
dppF	RHEC894_CH04253	RHEC894_CH00764	RHEC894_CH04253	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein.	0.836
dppF	dppD	RHEC894_CH00764	RHEC894_CH00763	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter ATP-binding protein DppD; Belongs to the ABC transporter superfamily.	0.969
dppF	oppD	RHEC894_CH00764	RHEC894_CH03174	Dipeptide ABC transporter ATP-binding protein DppF; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.	0.870