STRINGSTRING
RHEC894_CH00905 RHEC894_CH00905 RHEC894_CH03711 RHEC894_CH03711 RHEC894_CH03544 RHEC894_CH03544 RHEC894_CH03405 RHEC894_CH03405 RHEC894_CH03275 RHEC894_CH03275 RHEC894_CH03165 RHEC894_CH03165 flgI flgI flgG flgG fliE fliE flgC flgC flgB flgB flgF flgF fliM fliM fliN fliN fliG fliG flhB flhB fliF fliF RHEC894_CH00638 RHEC894_CH00638 RHEC894_CH00532 RHEC894_CH00532 RHEC894_CH00242 RHEC894_CH00242 RHEC894_CH00241 RHEC894_CH00241 cpaF cpaF cpaE cpaE cpaD cpaD cpaC cpaC cpaB cpaB RHEC894_CH00235 RHEC894_CH00235 RHEC894_CH00234 RHEC894_CH00234 RHEC894_CH00233 RHEC894_CH00233 infB infB RHEC894_CH03932 RHEC894_CH03932 tdh tdh RHEC894_CH02579 RHEC894_CH02579 RHEC894_CH02434 RHEC894_CH02434 RHEC894_CH02297 RHEC894_CH02297 RHEC894_CH01976 RHEC894_CH01976 trbB-1 trbB-1 RHEC894_CH01784 RHEC894_CH01784 phhA phhA RHEC894_CH01567 RHEC894_CH01567 RHEC894_CH01097 RHEC894_CH01097 RHEC894_CH01090 RHEC894_CH01090 RHEC894_CH03899 RHEC894_CH03899 RHEC894_CH00716 RHEC894_CH00716 fliQ fliQ flgD flgD flgK-1 flgK-1 flgE-1 flgE-1 motB motB fliP fliP flgH flgH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RHEC894_CH00905Uncharacterized protein. (1111 aa)
RHEC894_CH03711TctA family tripartite tricarboxylate transporter protein. (505 aa)
RHEC894_CH03544TctA family tripartite tricarboxylate transporter protein. (501 aa)
RHEC894_CH03405Uncharacterized protein. (116 aa)
RHEC894_CH03275Uncharacterized protein. (278 aa)
RHEC894_CH03165Metal-dependent phosphohydrolase HD domain-containing protein. (304 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (373 aa)
flgGFlagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa)
fliEFlagellar hook-basal body complex protein FliE. (114 aa)
flgCFlagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (138 aa)
flgBFlagellar basal body rod protein FlgB. (130 aa)
flgFFlagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family. (244 aa)
fliMFlagellar motor switch protein FliM. (315 aa)
fliNFlagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (195 aa)
fliGFlagellar motor switch protein FliG. (346 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (371 aa)
fliFFlagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (563 aa)
RHEC894_CH00638Zn-dependent alcohol dehydrogenase GroES-like protein. (336 aa)
RHEC894_CH00532Zn-dependent alcohol dehydrogenase GroES-like protein. (338 aa)
RHEC894_CH00242Type II secretion system F domain-containing protein. (328 aa)
RHEC894_CH00241Type II secretion system F domain-containing protein. (335 aa)
cpaFFlp pilus assembly ATP-binding protein CpaF. (491 aa)
cpaEFlp pilus assembly ATP-binding protein CpaE. (425 aa)
cpaDPilus biogenesis protein CpaD. (252 aa)
cpaCFlp pilus assembly secretion protein CpaC; Belongs to the bacterial secretin family. (499 aa)
cpaBFlp pilus assembly protein CpaB. (271 aa)
RHEC894_CH00235Prepilin type IV endopeptidase protein. (170 aa)
RHEC894_CH00234Flp/Fap pilin component protein. (62 aa)
RHEC894_CH00233Pilus formation domain-containing protein. (136 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (918 aa)
RHEC894_CH03932Flp/Fap pilin component protein. (55 aa)
tdhL-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (345 aa)
RHEC894_CH02579O-methyltransferase protein. (205 aa)
RHEC894_CH02434Pentapeptide repeat-containing protein. (120 aa)
RHEC894_CH02297Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (101 aa)
RHEC894_CH01976Uncharacterized protein. (224 aa)
trbB-1Conjugal transfer protein TrbB 1. (327 aa)
RHEC894_CH01784Short-chain dehydrogenase protein. (277 aa)
phhAPhenylalanine 4-monooxygenase. (263 aa)
RHEC894_CH01567SAM-dependent methyltransferase protein. (201 aa)
RHEC894_CH01097Uncharacterized protein. (531 aa)
RHEC894_CH01090Uncharacterized protein. (254 aa)
RHEC894_CH03899Uncharacterized protein. (311 aa)
RHEC894_CH00716Flagellar biosynthesis protein FliR. (250 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
flgDFlagellar basal body rod modification protein FlgD. (148 aa)
flgK-1Flagellar hook-associated protein FlgK 1. (495 aa)
flgE-1Flagellar hook protein FlgE. (435 aa)
motBFlagellar motor protein MotB. (460 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (245 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (238 aa)
Your Current Organism:
Rhizobium sp. CIAT894
NCBI taxonomy Id: 2020312
Other names: R. sp. CIAT894
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