(68 nodes) Plasma membrane protein complex network (Rhizobium sp. CIAT894)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	tolR	Biopolymer transporter protein ExbD/TolR. (151 aa)
	RHEC894_CH03738	FecR family protein. (338 aa)
	RHEC894_CH03807	Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (328 aa)
	RHEC894_CH03834	Sugar ABC transporter permease protein. (276 aa)
	RHEC894_CH03861	Sugar ABC transporter permease protein. (325 aa)
	RHEC894_CH03890	Ion transport 2 family protein. (139 aa)
	RHEC894_CH04048	Formate dehydrogenase gamma subunit protein. (159 aa)
	sdhB	Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (259 aa)
	fbpC-2	Fe(3+) ABC transporter ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily. (345 aa)
	RHEC894_CH04258	Sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
	RHEC894_CH04307	Lipoprotein-releasing system ATP-binding protein. (230 aa)
	RHEC894_CH00529	ABC transporter substrate-binding protein. (302 aa)
	aglG	Alpha-glucoside ABC transporter permease protein AglG. (387 aa)
	potG	Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (380 aa)
	potH	Prutescine ABC transporter permease protein PotH. (303 aa)
	potI	Prutescine ABC transporter permease protein PotI. (272 aa)
	bioM	Biotin/cobalt ABC transporter ATP-binding protein. (224 aa)
	RHEC894_CH00971	Mn/Zn ABC transporter ATP-binding protein. (249 aa)
	RHEC894_CH01032	Proline/glycine betaine ABC transporter substrate-binding protein. (333 aa)
	RHEC894_CH01424	YjgP/YjgQ family permease protein. (362 aa)
	RHEC894_CH01425	YjgP/YjgQ family permease protein. (393 aa)
	nuoB	NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (194 aa)
	nuoI	NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
	nuoK	NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
	lolC	Lipoprotein-releasing system transmembrane protein LolC. (434 aa)
	lolD-1	Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (227 aa)
	RHEC894_CH01711	Sugar ABC transporter permease protein. (323 aa)
	nasA	Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (885 aa)
	tatA	Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (63 aa)
	tatB	Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (208 aa)
	tatC	Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (275 aa)
	aapJ	General L-amino acid ABC transporter substrate-binding protein AapJ; Belongs to the bacterial solute-binding protein 3 family. (341 aa)
	RHEC894_CH02048	Amino acid ABC transporter substrate-binding protein. (343 aa)
	RHEC894_CH02096	Sugar ABC transporter permease protein. (282 aa)
	RHEC894_CH02116	Sugar ABC transporter ATP-binding protein. (522 aa)
	RHEC894_CH02122	Sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (337 aa)
	fbpC-1	Fe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (353 aa)
	RHEC894_CH02386	Sulfate transporter/antisigma-factor antagonist STAS domain-containing protein. (394 aa)
	RHEC894_CH02439	Iron-siderophore ABC transporter substrate-binding protein. (378 aa)
	RHEC894_CH02441	Iron-siderophore ABC transporter ATP-binding protein. (250 aa)
	rbsC-2	Ribose ABC transporter permease protein RbsC 2; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
	RHEC894_CH02505	ABC transporter permease protein. (314 aa)
	RHEC894_CH02548	Proline/glycine betaine ABC transporter substrate-binding protein. (331 aa)
	RHEC894_CH02659	ABC transporter ATP-binding protein. (232 aa)
	RHEC894_CH02671	Ferric enterobactin ABC transporter ATP-binding protein. (254 aa)
	RHEC894_CH02711	Sugar ABC transporter permease protein. (283 aa)
	znuC	Zinc import ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (322 aa)
	RHEC894_CH02783	Uncharacterized protein. (632 aa)
	potA-1	Spermidine/putrescine ABC transporter ATP-binding protein PotA 1; Belongs to the ABC transporter superfamily. (353 aa)
	RHEC894_CH02957	Sugar ABC transporter permease protein. (279 aa)
	RHEC894_CH02971	Spermidine/putrescine ABC transporter permease protein. (301 aa)
	potA-2	Spermidine/putrescine ABC transporter ATP-binding protein PotA 2; Belongs to the ABC transporter superfamily. (362 aa)
	RHEC894_CH03055	Sugar ABC transporter permease protein. (312 aa)
	RHEC894_CH03058	Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (331 aa)
	RHEC894_CH03159	Proline/glycine betaine/choline ABC transporter substrate-binding protein. (318 aa)
	RHEC894_CH03161	Proline/glycine betaine/choline ABC transporter ATP-binding protein. (350 aa)
	RHEC894_CH03330	Small multidrug resistance protein. (113 aa)
	ugpE	Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (304 aa)
	RHEC894_CH03538	Spermidine/putrescine ABC transporter permease protein. (275 aa)
	RHEC894_CH03540	Spermidine/putrescine ABC transporter ATP-binding protein. (340 aa)
	RHEC894_CH00178	ABC transporter permease protein. (389 aa)
	potA	Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (357 aa)
	RHEC894_CH00186	Phosphonate ABC transporter permease protein. (447 aa)
	phnE	Phosphonate ABC transporter permease protein PhnE. (319 aa)
	RHEC894_CH00220	Sugar ABC transporter ATP-binding protein. (503 aa)
	rbsC-1	Ribose ABC transporter permease protein RbsC 1; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
	RHEC894_CH00439	ABC transporter ATP-binding protein. (258 aa)
	RHEC894_CH00527	ABC transporter ATP-binding protein. (314 aa)

Your Current Organism:

Rhizobium sp. CIAT894

NCBI taxonomy Id: 2020312
Other names: R. sp. CIAT894

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RHEC894_CH00178	RHEC894_CH03540	RHEC894_CH00178	RHEC894_CH03540	ABC transporter permease protein.	Spermidine/putrescine ABC transporter ATP-binding protein.	0.731
RHEC894_CH00178	RHEC894_CH03807	RHEC894_CH00178	RHEC894_CH03807	ABC transporter permease protein.	Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.860
RHEC894_CH00178	fbpC-1	RHEC894_CH00178	RHEC894_CH02162	ABC transporter permease protein.	Fe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.776
RHEC894_CH00178	fbpC-2	RHEC894_CH00178	RHEC894_CH04185	ABC transporter permease protein.	Fe(3+) ABC transporter ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily.	0.462
RHEC894_CH00178	potA	RHEC894_CH00178	RHEC894_CH00179	ABC transporter permease protein.	Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.976
RHEC894_CH00178	potA-1	RHEC894_CH00178	RHEC894_CH02954	ABC transporter permease protein.	Spermidine/putrescine ABC transporter ATP-binding protein PotA 1; Belongs to the ABC transporter superfamily.	0.732
RHEC894_CH00178	potA-2	RHEC894_CH00178	RHEC894_CH02973	ABC transporter permease protein.	Spermidine/putrescine ABC transporter ATP-binding protein PotA 2; Belongs to the ABC transporter superfamily.	0.800
RHEC894_CH00178	potG	RHEC894_CH00178	RHEC894_CH00746	ABC transporter permease protein.	Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.878
RHEC894_CH00178	potI	RHEC894_CH00178	RHEC894_CH00748	ABC transporter permease protein.	Prutescine ABC transporter permease protein PotI.	0.915
RHEC894_CH00186	phnE	RHEC894_CH00186	RHEC894_CH00187	Phosphonate ABC transporter permease protein.	Phosphonate ABC transporter permease protein PhnE.	0.950
RHEC894_CH00220	RHEC894_CH02116	RHEC894_CH00220	RHEC894_CH02116	Sugar ABC transporter ATP-binding protein.	Sugar ABC transporter ATP-binding protein.	0.739
RHEC894_CH00220	RHEC894_CH03055	RHEC894_CH00220	RHEC894_CH03055	Sugar ABC transporter ATP-binding protein.	Sugar ABC transporter permease protein.	0.497
RHEC894_CH00220	RHEC894_CH03834	RHEC894_CH00220	RHEC894_CH03834	Sugar ABC transporter ATP-binding protein.	Sugar ABC transporter permease protein.	0.497
RHEC894_CH00439	RHEC894_CH01424	RHEC894_CH00439	RHEC894_CH01424	ABC transporter ATP-binding protein.	YjgP/YjgQ family permease protein.	0.996
RHEC894_CH00439	RHEC894_CH01425	RHEC894_CH00439	RHEC894_CH01425	ABC transporter ATP-binding protein.	YjgP/YjgQ family permease protein.	0.996
RHEC894_CH00439	RHEC894_CH02386	RHEC894_CH00439	RHEC894_CH02386	ABC transporter ATP-binding protein.	Sulfate transporter/antisigma-factor antagonist STAS domain-containing protein.	0.641
RHEC894_CH00439	RHEC894_CH02441	RHEC894_CH00439	RHEC894_CH02441	ABC transporter ATP-binding protein.	Iron-siderophore ABC transporter ATP-binding protein.	0.453
RHEC894_CH00439	RHEC894_CH02671	RHEC894_CH00439	RHEC894_CH02671	ABC transporter ATP-binding protein.	Ferric enterobactin ABC transporter ATP-binding protein.	0.452
RHEC894_CH00439	fbpC-2	RHEC894_CH00439	RHEC894_CH04185	ABC transporter ATP-binding protein.	Fe(3+) ABC transporter ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily.	0.406
RHEC894_CH00439	tolR	RHEC894_CH00439	RHEC894_CH03580	ABC transporter ATP-binding protein.	Biopolymer transporter protein ExbD/TolR.	0.478