(45 nodes) Flagellar assembly network (Rhizobium sp. CIAT894)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	flaC-3	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (303 aa)
	fliF	Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (563 aa)
	flhB	Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (371 aa)
	fliG	Flagellar motor switch protein FliG. (346 aa)
	fliN	Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (195 aa)
	fliM	Flagellar motor switch protein FliM. (315 aa)
	motA	Motility protein MotA. (290 aa)
	flgF	Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family. (244 aa)
	fliI	Flagellum-specific ATP synthase. (465 aa)
	flgB	Flagellar basal body rod protein FlgB. (130 aa)
	flgC	Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (138 aa)
	fliE	Flagellar hook-basal body complex protein FliE. (114 aa)
	flgG	Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa)
	flgA	Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (160 aa)
	flgI	Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (373 aa)
	flgH	Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (238 aa)
	fliP	Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (245 aa)
	flaC-1	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (301 aa)
	flaC-2	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (302 aa)
	flaC-4	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (320 aa)
	motB	Flagellar motor protein MotB. (460 aa)
	RHEC894_CH00705	Chemotaxis motility protein. (481 aa)
	flgE-1	Flagellar hook protein FlgE. (435 aa)
	flgK-1	Flagellar hook-associated protein FlgK 1. (495 aa)
	flgL-1	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (350 aa)
	flgD	Flagellar basal body rod modification protein FlgD. (148 aa)
	fliQ	Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
	flhA	Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (695 aa)
	RHEC894_CH00716	Flagellar biosynthesis protein FliR. (250 aa)
	RHEC894_CH00905	Uncharacterized protein. (1111 aa)
	RHEC894_CH01215	Uncharacterized protein. (129 aa)
	RHEC894_CH01325	Sel1-like protein. (88 aa)
	exoR	Exopolysaccharide production negative regulator ExoR. (267 aa)
	RHEC894_CH01975	DUF3597 domain-containing protein. (144 aa)
	RHEC894_CH02297	Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (101 aa)
	RHEC894_CH02365	Flagellar biosynthesis protein. (351 aa)
	RHEC894_CH02464	OmpA/MotB family outer membrane protein. (758 aa)
	RHEC894_CH02861	OmpA/MotB family outer membrane protein. (221 aa)
	RHEC894_CH02863	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (332 aa)
	RHEC894_CH03018	Uncharacterized protein. (357 aa)
	RHEC894_CH03019	Uncharacterized protein. (245 aa)
	pal	Peptidoglycan-associated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (178 aa)
	RHEC894_CH03634	OmpA/MotB family outer membrane protein. (343 aa)
	RHEC894_CH03646	Tetratricopeptide repeat-containing protein. (360 aa)
	flaC-5	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (311 aa)

Your Current Organism:

Rhizobium sp. CIAT894

NCBI taxonomy Id: 2020312
Other names: R. sp. CIAT894

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RHEC894_CH00705	RHEC894_CH00716	RHEC894_CH00705	RHEC894_CH00716	Chemotaxis motility protein.	Flagellar biosynthesis protein FliR.	0.879
RHEC894_CH00705	RHEC894_CH00905	RHEC894_CH00705	RHEC894_CH00905	Chemotaxis motility protein.	Uncharacterized protein.	0.769
RHEC894_CH00705	RHEC894_CH02297	RHEC894_CH00705	RHEC894_CH02297	Chemotaxis motility protein.	Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.	0.848
RHEC894_CH00705	RHEC894_CH02863	RHEC894_CH00705	RHEC894_CH02863	Chemotaxis motility protein.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.623
RHEC894_CH00705	RHEC894_CH03634	RHEC894_CH00705	RHEC894_CH03634	Chemotaxis motility protein.	OmpA/MotB family outer membrane protein.	0.634
RHEC894_CH00705	flaC-1	RHEC894_CH00705	RHEC894_CH00698	Chemotaxis motility protein.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.670
RHEC894_CH00705	flaC-2	RHEC894_CH00705	RHEC894_CH00699	Chemotaxis motility protein.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.683
RHEC894_CH00705	flaC-3	RHEC894_CH00705	RHEC894_CH00700	Chemotaxis motility protein.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.712
RHEC894_CH00705	flaC-4	RHEC894_CH00705	RHEC894_CH00701	Chemotaxis motility protein.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.782
RHEC894_CH00705	flaC-5	RHEC894_CH00705	RHEC894_CH04325	Chemotaxis motility protein.	Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.623
RHEC894_CH00705	flgA	RHEC894_CH00705	RHEC894_CH00689	Chemotaxis motility protein.	Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	0.811
RHEC894_CH00705	flgB	RHEC894_CH00705	RHEC894_CH00685	Chemotaxis motility protein.	Flagellar basal body rod protein FlgB.	0.947
RHEC894_CH00705	flgC	RHEC894_CH00705	RHEC894_CH00686	Chemotaxis motility protein.	Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.	0.848
RHEC894_CH00705	flgD	RHEC894_CH00705	RHEC894_CH00713	Chemotaxis motility protein.	Flagellar basal body rod modification protein FlgD.	0.974
RHEC894_CH00705	flgE-1	RHEC894_CH00705	RHEC894_CH00708	Chemotaxis motility protein.	Flagellar hook protein FlgE.	0.973
RHEC894_CH00705	flgF	RHEC894_CH00705	RHEC894_CH00682	Chemotaxis motility protein.	Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.	0.769
RHEC894_CH00705	flgG	RHEC894_CH00705	RHEC894_CH00688	Chemotaxis motility protein.	Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.	0.769
RHEC894_CH00705	flgH	RHEC894_CH00705	RHEC894_CH00692	Chemotaxis motility protein.	Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.	0.948
RHEC894_CH00705	flgI	RHEC894_CH00705	RHEC894_CH00690	Chemotaxis motility protein.	Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.	0.936
RHEC894_CH00705	flgK-1	RHEC894_CH00705	RHEC894_CH00709	Chemotaxis motility protein.	Flagellar hook-associated protein FlgK 1.	0.959