STRINGSTRING
Sde_3197 Sde_3197 Sde_2901 Sde_2901 Sde_2239 Sde_2239 Sde_2013 Sde_2013 Sde_1473 Sde_1473 Sde_1084 Sde_1084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sde_3197Protein of unknown function DUF540. (268 aa)
Sde_2901Cysteine synthase. (317 aa)
Sde_2239Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. (296 aa)
Sde_2013Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein. (554 aa)
Sde_1473Flavodoxin/nitric oxide synthase. (149 aa)
Sde_1084Serine O-acetyltransferase. (277 aa)
Your Current Organism:
Saccharophagus degradans
NCBI taxonomy Id: 203122
Other names: Microbulbifer degradans 2-40, Microbulbifer sp. 2-40, S. degradans 2-40, Saccharophagus degradans 2-40, Saccharophagus degradans ATCC 43961, Saccharophagus degradans str. 2-40, Saccharophagus degradans strain 2-40, bacterium 2-40
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