STRINGSTRING
Sde_2283 Sde_2283 Sde_1293 Sde_1293 Sde_1364 Sde_1364 Sde_1365 Sde_1365 potA potA Sde_1373 Sde_1373 Sde_0057 Sde_0057 znuC znuC Sde_0366 Sde_0366 Sde_0724 Sde_0724 Sde_0832 Sde_0832 Sde_1119 Sde_1119 Sde_2448 Sde_2448 Sde_3936 Sde_3936 Sde_3933 Sde_3933 Sde_3864 Sde_3864 Sde_3767 Sde_3767 Sde_3378 Sde_3378 Sde_3377 Sde_3377 Sde_3236 Sde_3236 Sde_3235 Sde_3235 Sde_3178 Sde_3178 Sde_3096 Sde_3096 Sde_2579 Sde_2579 Sde_1374 Sde_1374 Sde_1451 Sde_1451 Sde_1700 Sde_1700 Sde_1712 Sde_1712 Sde_1731 Sde_1731 Sde_1756 Sde_1756 Sde_1930 Sde_1930 Sde_1933 Sde_1933 Sde_1953 Sde_1953 Sde_1956 Sde_1956 Sde_2268 Sde_2268
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sde_2283Methyl-accepting chemotaxis sensory transducer; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (361 aa)
Sde_1293Type I secretion outer membrane protein, TolC. (430 aa)
Sde_1364Binding-protein-dependent transport systems inner membrane component. (270 aa)
Sde_1365Binding-protein-dependent transport systems inner membrane component. (302 aa)
potASpermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (373 aa)
Sde_1373Permease YjgP/YjgQ. (360 aa)
Sde_0057ABC-3. (262 aa)
znuCABC transporter related; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (261 aa)
Sde_0366Type I secretion outer membrane protein, TolC. (454 aa)
Sde_07242-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (164 aa)
Sde_0832Cl- channel, voltage gated. (585 aa)
Sde_1119Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (369 aa)
Sde_2448Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (359 aa)
Sde_3936Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (491 aa)
Sde_3933Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (395 aa)
Sde_3864Ion transport protein. (228 aa)
Sde_3767Biotin/lipoyl attachment. (368 aa)
Sde_3378Deoxynucleoside kinase. (230 aa)
Sde_33772-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (172 aa)
Sde_3236GAF domain protein. (578 aa)
Sde_3235Peptidase, M50 family. (711 aa)
Sde_3178PAS/PAC sensor signal transduction histidine kinase. (241 aa)
Sde_3096Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (398 aa)
Sde_2579Ion transport protein. (298 aa)
Sde_1374Permease YjgP/YjgQ. (352 aa)
Sde_1451ABC transporter related. (267 aa)
Sde_1700CBS domain protein. (133 aa)
Sde_1712CBS domain protein. (131 aa)
Sde_1731Cyclic nucleotide-binding. (376 aa)
Sde_1756Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (363 aa)
Sde_1930Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (629 aa)
Sde_1933Ion transport 2. (102 aa)
Sde_1953Iron permease FTR1. (637 aa)
Sde_1956Putative RND efflux system protein, MFP subunit. (358 aa)
Sde_2268Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (423 aa)
Your Current Organism:
Saccharophagus degradans
NCBI taxonomy Id: 203122
Other names: Microbulbifer degradans 2-40, Microbulbifer sp. 2-40, S. degradans 2-40, Saccharophagus degradans 2-40, Saccharophagus degradans ATCC 43961, Saccharophagus degradans str. 2-40, Saccharophagus degradans strain 2-40, bacterium 2-40
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