STRINGSTRING
Tery_0915 Tery_0915 Tery_0916 Tery_0916 Tery_1567 Tery_1567 Tery_1949 Tery_1949 Tery_4539 Tery_4539
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_0915TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: cyb:CYB_1598 ferredoxin, 2Fe-2S. (100 aa)
Tery_0916TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: gvi:gsr3623 ferredoxin. (98 aa)
Tery_1567Ferredoxin thioredoxin reductase, beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. (121 aa)
Tery_1949PFAM: ferredoxin thioredoxin reductase, alpha chain; KEGG: ava:Ava_0401 ferredoxin thioredoxin reductase, alpha chain. (73 aa)
Tery_4539TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ava:Ava_0568 ferredoxin (2Fe-2S). (111 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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