STRINGSTRING
Tery_1560 Tery_1560 Tery_1868 Tery_1868 Tery_3943 Tery_3943 Tery_4448 Tery_4448 Tery_4449 Tery_4449
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_1560TIGRFAM: TonB family protein; KEGG: mmu:96875 proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein). (537 aa)
Tery_1868PFAM: MotA/TolQ/ExbB proton channel; KEGG: mja:MJ1322 purine NTPase. (474 aa)
Tery_3943PFAM: periplasmic binding protein; KEGG: ava:Ava_2945 putative iron transport system substrate-binding protein. (309 aa)
Tery_4448PFAM: MotA/TolQ/ExbB proton channel; KEGG: syn:slr0677 biopolymer transport ExbB protein 2. (261 aa)
Tery_4449PFAM: Biopolymer transport protein ExbD/TolR; KEGG: syn:slr0678 putative biopolymer transport ExbD protein. (207 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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