STRINGSTRING
Tery_2164 Tery_2164 Tery_2165 Tery_2165 Tery_2737 Tery_2737 Tery_2738 Tery_2738 Tery_3053 Tery_3053 Tery_5015 Tery_5015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_2164PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_2673 ABC transporter-like. (261 aa)
Tery_2165PFAM: Mammalian cell entry related chemotaxis sensory transducer; KEGG: ana:alr0181 putative ABC transport system substrate-binding protein. (476 aa)
Tery_2737KEGG: ava:Ava_1849 hypothetical protein. (495 aa)
Tery_2738KEGG: ava:Ava_1850 hypothetical protein. (281 aa)
Tery_3053PFAM: protein of unknown function DUF140; KEGG: ava:Ava_1687 protein of unknown function DUF140; Belongs to the MlaE permease family. (249 aa)
Tery_5015Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: syn:slr1859 phosphoprotein substrate of icfG gene cluster; Belongs to the anti-sigma-factor antagonist family. (112 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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