STRINGSTRING
Tery_0206 Tery_0206 Tery_0216 Tery_0216 Tery_0672 Tery_0672 Tery_1193 Tery_1193 Tery_2475 Tery_2475 Tery_2476 Tery_2476 Tery_3789 Tery_3789 Tery_3847 Tery_3847 Tery_3849 Tery_3849 Tery_3970 Tery_3970 Tery_4114 Tery_4114 Tery_4197 Tery_4197 Tery_4320 Tery_4320 Tery_4409 Tery_4409 Tery_4487 Tery_4487 Tery_4488 Tery_4488 Tery_4515 Tery_4515 Tery_4706 Tery_4706 Tery_4912 Tery_4912
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_0206KEGG: ava:Ava_2889 hypothetical protein. (270 aa)
Tery_0216TIGRFAM: transcriptional regulator, AbrB family; KEGG: syn:sll0359 hypothetical protein. (137 aa)
Tery_0672KEGG: ana:alr4308 hypothetical protein. (122 aa)
Tery_1193KEGG: ava:Ava_1259 hypothetical protein. (117 aa)
Tery_2475KEGG: ava:Ava_0935 hypothetical protein. (102 aa)
Tery_2476KEGG: ava:Ava_3210 hypothetical protein. (516 aa)
Tery_3789KEGG: ana:all0333 hypothetical protein. (105 aa)
Tery_3847KEGG: ava:Ava_4468 transferase hexapeptide repeat. (304 aa)
Tery_3849Carbonate dehydratase; PFAM: ribulose bisphosphate carboxylase, small chain transferase hexapeptide repeat; KEGG: gvi:gll2093 carbon dioxide concentrating mechanism protein. (672 aa)
Tery_3970KEGG: ava:Ava_1424 hypothetical protein. (372 aa)
Tery_4114PFAM: Mo-dependent nitrogenase-like; KEGG: ava:Ava_1587 Mo-dependent nitrogenase-like. (241 aa)
Tery_4197KEGG: ava:Ava_1013 hypothetical protein. (170 aa)
Tery_4320KEGG: ava:Ava_0092 hypothetical protein. (117 aa)
Tery_4409PFAM: chaperonin-like RbcX; KEGG: ava:Ava_3906 chaperonin-like RbcX. (128 aa)
Tery_4487TIGRFAM: conserved hypothetical protein; KEGG: ava:Ava_3680 hypothetical protein. (173 aa)
Tery_4488PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ava:Ava_3679 glyoxalase/bleomycin resistance protein/dioxygenase. (145 aa)
Tery_4515PFAM: S-layer-like region Carbohydrate-selective porin OprB; KEGG: ava:Ava_4059 S-layer region-like; Belongs to the OprB family. (589 aa)
Tery_4706KEGG: ava:Ava_3431 hypothetical protein. (210 aa)
Tery_4912KEGG: ava:Ava_2084 serine/threonine protein kinase. (58 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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