STRINGSTRING
Tery_1193 Tery_1193 Tery_3970 Tery_3970 Tery_4114 Tery_4114 Tery_4320 Tery_4320 Tery_4409 Tery_4409
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_1193KEGG: ava:Ava_1259 hypothetical protein. (117 aa)
Tery_3970KEGG: ava:Ava_1424 hypothetical protein. (372 aa)
Tery_4114PFAM: Mo-dependent nitrogenase-like; KEGG: ava:Ava_1587 Mo-dependent nitrogenase-like. (241 aa)
Tery_4320KEGG: ava:Ava_0092 hypothetical protein. (117 aa)
Tery_4409PFAM: chaperonin-like RbcX; KEGG: ava:Ava_3906 chaperonin-like RbcX. (128 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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