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Tery_0210 Tery_0210 cbiA cbiA Tery_0768 Tery_0768 Tery_0786 Tery_0786 cbiD cbiD Tery_1288 Tery_1288 Tery_1552 Tery_1552 Tery_1670 Tery_1670 cobD cobD Tery_2088 Tery_2088 cobS cobS Tery_2739 Tery_2739 Tery_3432 Tery_3432 Tery_3745 Tery_3745 cobQ cobQ Tery_4361 Tery_4361 Tery_4366 Tery_4366 Tery_4427 Tery_4427 Tery_4685 Tery_4685 Tery_4741 Tery_4741
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_0210KEGG: syn:sll0099 precorrin-6y C5, 15-methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase. (437 aa)
cbiACobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (492 aa)
Tery_0768TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: syf:Synpcc7942_1853 precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (232 aa)
Tery_0786KEGG: ava:Ava_1898 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. (190 aa)
cbiDCobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (385 aa)
Tery_1288TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: ana:all3876 precorrin decarbocylase. (200 aa)
Tery_1552KEGG: ana:all4698 precorrin-3 methylase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family. (283 aa)
Tery_1670PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: ana:all0456 precorrin isomerase. (209 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (330 aa)
Tery_2088cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: ana:all0067 cob(I)alamin adenosyltransferase. (178 aa)
cobSCobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (254 aa)
Tery_2739KEGG: ava:Ava_0256 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK. (252 aa)
Tery_3432Adenosylcobinamide kinase; PFAM: cobalbumin biosynthesis enzyme; KEGG: ava:Ava_3872 adenosylcobinamide kinase. (187 aa)
Tery_3745PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: ava:Ava_0476 precorrin-8X methylmutase. (208 aa)
cobQAdenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (488 aa)
Tery_4361Hypothetical protein. (79 aa)
Tery_4366TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: syn:slr0969 Precorrin-3B C17-methyltransferase (Precorrin-3 methyltransferase) (Precorrin-3 methylase, necessary for ring contraction in the conversion from precorrin-3B to precorrin-4. (663 aa)
Tery_4427PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ava:Ava_2921 cobalamin (vitamin B12) biosynthesis CbiX protein. (293 aa)
Tery_4685cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: tel:tlr2245 probable adenosyltransferase. (377 aa)
Tery_4741PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: syn:sll0037 putative sirohydrochlorin cobaltochelatase. (347 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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