STRINGSTRING
Tery_1228 Tery_1228 Tery_2780 Tery_2780 Tery_2781 Tery_2781 Tery_2782 Tery_2782 Tery_2783 Tery_2783 Tery_3532 Tery_3532 Tery_3746 Tery_3746 Tery_4901 Tery_4901
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_1228PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_2514 ABC transporter-like. (231 aa)
Tery_2780PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_1753 ABC transporter-like. (244 aa)
Tery_2781TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: syn:sll0384 ABC-type cobalt transport system permease protein. (262 aa)
Tery_2782PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: syn:sll0383 cobalamin biosynthesis protein. (214 aa)
Tery_2783KEGG: syn:sll0382 hypothetical protein. (168 aa)
Tery_3532PFAM: BioY protein; KEGG: ava:Ava_2476 BioY protein. (194 aa)
Tery_3746PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_4987 ABC transporter-like. (217 aa)
Tery_4901PFAM: cobalt transport protein; KEGG: ava:Ava_2897 cobalt transport protein. (334 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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