STRINGSTRING
Tery_3030 Tery_3030 Tery_3031 Tery_3031 Tery_4421 Tery_4421 Tery_4422 Tery_4422 Tery_4791 Tery_4791
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_3030PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ava:Ava_0885 tripartite ATP-independent periplasmic transporter, DctQ component. (184 aa)
Tery_3031TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ava:Ava_0884 TRAP dicarboxylate transporter, DctM subunit. (447 aa)
Tery_4421TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (368 aa)
Tery_4422TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (361 aa)
Tery_4791PFAM: Auxin Efflux Carrier; KEGG: ttj:TTHA0659 hypothetical protein. (302 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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