STRINGSTRING
Tery_0799 Tery_0799 Tery_0800 Tery_0800 Tery_0801 Tery_0801 Tery_1940 Tery_1940 Tery_3673 Tery_3673 Tery_3674 Tery_3674 Tery_3691 Tery_3691 Tery_3692 Tery_3692
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_0799PFAM: inner-membrane translocator; KEGG: cpe:CPE1343 probable galactoside ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
Tery_0800PFAM: ABC transporter related; SMART: ATPase; KEGG: msu:MS0642 ABC-type sugar (aldose) transport system, ATPase component. (509 aa)
Tery_0801KEGG: cpe:CPE1341 probable galactoside ABC transporter. (342 aa)
Tery_1940PfkB; PFAM: PfkB; KEGG: ana:alr4681 probable sugar kinase. (294 aa)
Tery_3673PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_2599 ABC transporter-like. (491 aa)
Tery_3674PFAM: basic membrane lipoprotein; KEGG: ana:alr5361 putative simple sugar transport system substrate-binding protein. (355 aa)
Tery_3691PFAM: inner-membrane translocator; KEGG: ana:alr5367 putative simple sugar transport system permease protein. (338 aa)
Tery_3692PFAM: inner-membrane translocator; KEGG: ana:alr5368 putative simple sugar transport system permease protein. (310 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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