STRINGSTRING
Tery_1618 Tery_1618 Tery_1252 Tery_1252 Tery_0859 Tery_0859 Tery_3626 Tery_3626 Tery_2353 Tery_2353 Tery_1631 Tery_1631
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_1618KEGG: cya:CYA_1752 hypothetical protein. (93 aa)
Tery_1252TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: mba:Mbar_A2093 sodium/calcium exchanger protein. (314 aa)
Tery_0859PFAM: TrkA-N sodium/hydrogen exchanger; KEGG: ana:alr0252 Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (640 aa)
Tery_3626Calcium/proton antiporter, CaCA family; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons. (372 aa)
Tery_2353UspA; PFAM: UspA sodium/hydrogen exchanger; KEGG: ava:Ava_0089 sodium/hydrogen exchanger. (541 aa)
Tery_1631PFAM: sodium/hydrogen exchanger; KEGG: ana:alr0091 Na+/H+-exchanging protein. (474 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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