STRINGSTRING
Tery_2739 Tery_2739 dapB dapB fabI fabI Tery_0879 Tery_0879 Tery_0109 Tery_0109 Tery_1823 Tery_1823 Tery_3777 Tery_3777 Tery_2267 Tery_2267 Tery_2701 Tery_2701
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_2739KEGG: ava:Ava_0256 precorrin-6x reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK. (252 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. (275 aa)
fabIEnoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ava:Ava_3284 enoyl-(acyl carrier protein) reductase. (258 aa)
Tery_0879TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding FAD dependent oxidoreductase; KEGG: ana:alr1209 hypothetical protein. (370 aa)
Tery_0109NADPH-protochlorophyllide oxidoreductase / chlorophyll synthase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide). (323 aa)
Tery_1823TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; KEGG: ava:Ava_1497 geranylgeranyl reductase. (406 aa)
Tery_3777TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding HI0933-like protein FAD dependent oxidoreductase; KEGG: ana:alr1209 hypothetical protein. (368 aa)
Tery_2267PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (419 aa)
Tery_2701Arogenate dehydrogenase (NADP); PFAM: Prephenate dehydrogenase; KEGG: ava:Ava_4397 prephenate dehydrogenase. (283 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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