STRINGSTRING
Tery_3948 Tery_3948 Tery_0412 Tery_0412 Tery_0864 Tery_0864 Tery_1009 Tery_1009 Tery_1196 Tery_1196 Tery_1468 Tery_1468 Tery_1492 Tery_1492 Tery_1600 Tery_1600 Tery_1609 Tery_1609 Tery_1623 Tery_1623 Tery_1836 Tery_1836 pyrR pyrR Tery_1947 Tery_1947 Tery_2273 Tery_2273 Tery_2374 Tery_2374 Tery_2375 Tery_2375 Tery_2549 Tery_2549 Tery_2568 Tery_2568 Tery_2742 Tery_2742 Tery_2911 Tery_2911 truA truA Tery_3195 Tery_3195 Tery_3216 Tery_3216 nth nth Tery_3461 Tery_3461 Tery_3569 Tery_3569 Tery_3622 Tery_3622 Tery_4018 Tery_4018 Tery_4123 Tery_4123 Tery_4457 Tery_4457 Tery_4749 Tery_4749 Tery_5034 Tery_5034 Tery_5036 Tery_5036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_3948TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase Domain of unknown function DUF1731; KEGG: ana:all2390 cell division inhibitor. (307 aa)
Tery_0412PFAM: phosphoribosyltransferase; KEGG: reu:Reut_A1154 phosphoribosyltransferase. (222 aa)
Tery_0864Hypothetical protein. (123 aa)
Tery_1009PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: cyb:CYB_2887 tetratricopeptide repeat protein. (273 aa)
Tery_1196KEGG: ava:Ava_0272 hypothetical protein. (217 aa)
Tery_1468KEGG: ava:Ava_0332 hypothetical protein. (108 aa)
Tery_1492PFAM: glycosyl transferase, family 2 TPR repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: mst:Msp_1540 partially conserved hypothetical protein. (1737 aa)
Tery_1600KEGG: ana:all1164 hypothetical protein. (123 aa)
Tery_1609PFAM: type II and III secretion system protein NolW-like Secretin/TonB, short N-terminal; KEGG: ava:Ava_3689 type II and III secretion system protein; Belongs to the bacterial secretin family. (801 aa)
Tery_1623KEGG: bja:bll7673 hypothetical protein. (613 aa)
Tery_1836PFAM: peptidase M10A and M12B, matrixin and adamalysin; SMART: Peptidase, metallopeptidases; KEGG: ava:Ava_0725 peptidase, metallopeptidase. (234 aa)
pyrRUracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. (176 aa)
Tery_1947PFAM: TPR repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: mba:Mbar_A2604 TPR repeat. (564 aa)
Tery_2273PFAM: OstA-like protein; KEGG: syn:slr0250 hypothetical protein. (172 aa)
Tery_2374KEGG: tel:tlr0362 unknown protein. (137 aa)
Tery_2375Conserved hypothetical protein; KEGG: tel:tlr0361 unknown protein. (661 aa)
Tery_2549Hypothetical protein; KEGG: ava:Ava_3164 Cna B-type. (947 aa)
Tery_2568PFAM: protein of unknown function DUF151; KEGG: ava:Ava_1415 protein of unknown function DUF151. (168 aa)
Tery_2742PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: syn:sll1628 hypothetical protein. (390 aa)
Tery_2911PFAM: protein of unknown function UPF0047; KEGG: ana:alr1040 hypothetical protein. (145 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (272 aa)
Tery_3195KEGG: ava:Ava_3002 hypothetical protein. (871 aa)
Tery_3216KEGG: bja:bll7673 hypothetical protein. (595 aa)
nthDNA-(apurinic or apyrimidinic site) lyase / endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (217 aa)
Tery_3461DSH-like; PFAM: helicase-like type III restriction enzyme, res subunit DEAD/DEAH box helicase-like DSH-like; KEGG: ava:Ava_2902 type III restriction enzyme, res subunit. (905 aa)
Tery_3569PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: ava:Ava_3507 protein prenyltransferase, alpha subunit. (314 aa)
Tery_3622Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (405 aa)
Tery_4018KEGG: ana:alr1785 hypothetical protein. (814 aa)
Tery_4123Hypothetical protein. (184 aa)
Tery_4457PFAM: protein of unknown function UPF0047; KEGG: ava:Ava_4874 hypothetical protein. (138 aa)
Tery_4749Multi-sensor signal transduction histidine kinase; PFAM: CBS domain containing protein GAF ATP-binding region, ATPase-like histidine kinase A-like; KEGG: tel:tll1831 two-component sensor histidine kinase. (792 aa)
Tery_5034TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: ava:Ava_2914 MazG. (270 aa)
Tery_5036PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: ava:Ava_2856 TPR repeat. (288 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.