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| | Tery_1402 | Hypothetical protein. (88 aa) |
| | gltX | glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (881 aa) |
| | rpsO | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | murI | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (270 aa) |
| | Tery_0115 | PFAM: glycosyl transferase, family 2 glycosyl transferase, group 1 TPR repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: gox:GOX0593 glycosyltransferase. (892 aa) |
| | Tery_0045 | PFAM: glycoside hydrolase, family 57; KEGG: ava:Ava_0382 glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family. (527 aa) |
| | Tery_1925 | Protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis; KEGG: ana:all5222 hypothetical protein. (801 aa) |
| | rplT | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa) |
| | rpmI | PFAM: ribosomal protein L35; KEGG: ava:Ava_3447 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | glgB | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (776 aa) |
| | metG | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. (530 aa) |
| | fmt | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (336 aa) |
| | Tery_1733 | PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: sco:SCO1469 hypothetical protein. (643 aa) |
| | leuS | TIGRFAM: leucyl-tRNA synthetase; KEGG: ana:alr3283 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (929 aa) |
| | Tery_1657 | PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: pmt:PMT0296 TPR repeat. (594 aa) |
| | Tery_1568 | Protein of unknown function DUF323; PFAM: peptidase S1 and S6, chymotrypsin/Hap TPR repeat protein of unknown function DUF323 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: ana:all3226 hypothetical protein. (820 aa) |
| | lgt | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (288 aa) |
| | trpS | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (339 aa) |
| | Tery_4663 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: ava:Ava_1505 30S ribosomal protein S1. (390 aa) |
| | rpsU-2 | PFAM: ribosomal protein S21; KEGG: ava:Ava_4643 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (62 aa) |
| | mraY | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (362 aa) |
| | gatC | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (97 aa) |
| | Tery_4577 | PFAM: O-antigen polymerase; KEGG: ava:Ava_3597 O-antigen polymerase. (480 aa) |
| | fusA2 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] (697 aa) |
| | murD | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (462 aa) |
| | glyS | Glycine--tRNA ligase; KEGG: ava:Ava_0794 glycyl-tRNA synthetase beta subunit. (719 aa) |
| | Tery_4395 | KEGG: ava:Ava_2020 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: transferase hexapeptide repeat Nucleotidyl transferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (428 aa) |
| | mltG | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (362 aa) |
| | ddl | D-alanine--D-alanine ligase; Cell wall formation. (366 aa) |
| | Tery_4203 | PFAM: Amidase; KEGG: ana:alr1018 Glu-tRNA(Gln) amidotransferase subunit A. (462 aa) |
| | lnt | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (584 aa) |
| | murE | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (509 aa) |
| | rpmB | PFAM: ribosomal protein L28; KEGG: syn:ssr1604 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | murC | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (556 aa) |
| | murB | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. (315 aa) |
| | cysS | KEGG: ana:all1092 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. (489 aa) |
| | Tery_3996 | PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: RNA-processing protein, HAT helix Tetratricopeptide region; KEGG: mma:MM0178 hypothetical protein. (1694 aa) |
| | argS | KEGG: ana:all3717 arginyl-tRNA-synthetase; TIGRFAM: arginyl-tRNA synthetase. (585 aa) |
| | infB | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (1059 aa) |
| | Tery_3937 | PFAM: glycosyl transferase, family 39; KEGG: syn:sll1946 hypothetical protein. (897 aa) |
| | rpsF | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. (117 aa) |
| | glyQ | Glycine--tRNA ligase; PFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: syf:Synpcc7942_2457 glycyl-tRNA synthetase, alpha subunit. (294 aa) |
| | gatB | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (494 aa) |
| | Tery_3809 | PFAM: glycosyl transferase, family 39; KEGG: nar:Saro_2794 hypothetical protein. (548 aa) |
| | Tery_3801 | PFAM: glycosyl transferase, family 39; KEGG: ana:all2870 unknown protein. (666 aa) |
| | frr | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (182 aa) |
| | Tery_3753 | Methyltransferase type 11; PFAM: glycosyl transferase, family 2 glycosyl transferase, group 1 Cyclopropane-fatty-acyl-phospholipid synthase UbiE/COQ5 methyltransferase Methyltransferase type 11 Methyltransferase type 12; KEGG: ava:Ava_2388 glycosyl transferase, family 2. (2490 aa) |
| | rpsR | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (72 aa) |
| | rpmG | PFAM: ribosomal protein L33; KEGG: ava:Ava_1320 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (62 aa) |
| | Tery_3696 | PFAM: O-antigen polymerase; KEGG: ava:Ava_2327 O-antigen polymerase. (461 aa) |
| | Tery_3617 | DALR anticodon binding. (300 aa) |
| | ileS | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (1152 aa) |
| | serS | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (425 aa) |
| | pheS | KEGG: ava:Ava_2115 phenylalanyl-tRNA synthetase alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase, class IIc aminoacyl tRNA synthetase, class II-like; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (331 aa) |
| | Tery_3477 | PFAM: glycosyl transferase, family 39; KEGG: ava:Ava_3121 glycosyl transferase, family 39. (564 aa) |
| | Tery_3473 | KEGG: ava:Ava_0779 hypothetical protein. (605 aa) |
| | Tery_3451 | Ribosomal protein PSRP-3/Ycf65; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. (99 aa) |
| | valS | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (911 aa) |
| | Tery_3374 | Ras superfamily GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (285 aa) |
| | Tery_3343 | PFAM: translation initiation factor SUI1; KEGG: ava:Ava_1910 hypothetical protein. (122 aa) |
| | Tery_3314 | PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: lpl:lp_1303a cell surface SD repeat protein precursor. (1240 aa) |
| | rodA | Cell cycle protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (417 aa) |
| | Tery_3283 | PFAM: ribosomal protein L25; KEGG: ava:Ava_2054 50S ribosomal protein L25; Belongs to the bacterial ribosomal protein bL25 family. (102 aa) |
| | rpsN | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (100 aa) |
| | rplU | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (136 aa) |
| | rpmA | PFAM: ribosomal protein L27; KEGG: ana:asl0146 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (95 aa) |
| | Tery_3238 | PFAM: glycosyl transferase, family 2 glycosyl transferase, group 1; KEGG: bce:BC0314 glycosyltransferase. (703 aa) |
| | murA | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (463 aa) |
| | Tery_3047 | PFAM: TPR repeat Tetratricopeptide TPR_4 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: tel:tlr0058 similar to serine protease. (508 aa) |
| | Tery_3016 | Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase Penicillin-binding protein, dimerisation domain; KEGG: cyb:CYB_0895 penicillin-binding protein. (603 aa) |
| | Tery_3014 | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: ava:Ava_0125 4Fe-4S ferredoxin, iron-sulfur binding. (405 aa) |
| | rplC | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (227 aa) |
| | rplD | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (212 aa) |
| | rplW | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (101 aa) |
| | Tery_1350 | PFAM: Amidase; KEGG: ana:all7525 amidase. (446 aa) |
| | Tery_1401 | Hypothetical protein. (81 aa) |
| | murG | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (374 aa) |
| | thrS | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S) Anticodon-binding Threonyl/alanyl tRNA synthetase, SAD; KEGG: ana:alr0335 threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (608 aa) |
| | rplI | LSU ribosomal protein L9P; Binds to the 23S rRNA. (152 aa) |
| | Tery_1488 | Hypothetical protein. (446 aa) |
| | Tery_1492 | PFAM: glycosyl transferase, family 2 TPR repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: mst:Msp_1540 partially conserved hypothetical protein. (1737 aa) |
| | Tery_1537 | TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: ava:Ava_3356 glucose-1-phosphate thymidylyltransferase, short form. (364 aa) |
| | Tery_1538 | Glycosyltransferase; KEGG: cac:CAC3069 predicted glycosyltransferase. (127 aa) |
| | rplB | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (287 aa) |
| | rpsS | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (91 aa) |
| | rplV | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (119 aa) |
| | rpsC | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (242 aa) |
| | rplP | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa) |
| | rpmC | PFAM: ribosomal protein L29; KEGG: syf:Synpcc7942_2224 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (82 aa) |
| | rpsQ | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (83 aa) |
| | rplN | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (122 aa) |
| | rplE | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (181 aa) |
| | rpsH | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (133 aa) |
| | rplF | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (179 aa) |
| | rplR | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa) |
| | rpsE | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (177 aa) |
| | rplO | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (161 aa) |
| | infA | Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (74 aa) |
| | rpmJ | PFAM: ribosomal protein L36; KEGG: ava:Ava_0712 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (127 aa) |
| | rpsK | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (131 aa) |
| | rplQ | PFAM: ribosomal protein L17; KEGG: syn:sll1819 50S ribosomal protein L17. (116 aa) |
| | rplM | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (151 aa) |
| | rpsI | PFAM: ribosomal protein S9; KEGG: ava:Ava_0719 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (136 aa) |
| | rpmE | LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (90 aa) |
| | prfA | Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (369 aa) |
| | Tery_2971 | PFAM: D-alanine--D-alanine ligase-like; KEGG: gsu:GSU3066 D-alanine--D-alanine ligase. (361 aa) |
| | Tery_2970 | KEGG: gsu:GSU3066 D-alanine--D-alanine ligase. (361 aa) |
| | rpsT | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (112 aa) |
| | prfC | Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (542 aa) |
| | pth | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (219 aa) |
| | Tery_2836 | Fibronectin-binding A-like; PFAM: protein of unknown function DUF814 Fibronectin-binding A-like; KEGG: ana:all4374 probable fibronectin/fibrinogen-binding protein. (583 aa) |
| | Tery_2768 | Hypothetical protein. (372 aa) |
| | Tery_2758 | KEGG: ava:Ava_4368 hypothetical protein. (154 aa) |
| | Tery_2724 | KEGG: ava:Ava_3185 hypothetical protein. (280 aa) |
| | murJ | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (539 aa) |
| | Tery_2661 | PFAM: glycosyl transferase, family 4; KEGG: ana:alr4807 probable glycosyltransferase. (372 aa) |
| | Tery_2637 | KEGG: stt:t1540 hypothetical protein. (516 aa) |
| | Tery_2634 | Conserved hypothetical protein; KEGG: ana:all9023 unknown protein. (532 aa) |
| | Tery_2582 | PFAM: protein of unknown function DUF1565; SMART: Parallel beta-helix repeat; KEGG: ana:all1342 unknown protein. (626 aa) |
| | Tery_2537 | RNA-binding protein (contains KH domain)-like; KEGG: ana:alr1954 hypothetical protein. (142 aa) |
| | rpsP | PFAM: ribosomal protein S16; KEGG: ava:Ava_4357 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (141 aa) |
| | Tery_2526 | PFAM: TPR repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: pmn:PMN2A_1233 TPR repeat. (1154 aa) |
| | Tery_2525 | Conserved hypothetical protein; KEGG: ana:alr1045 unknown protein. (314 aa) |
| | Tery_2521 | KEGG: ava:Ava_0322 hypothetical protein. (332 aa) |
| | Tery_2520 | KEGG: ava:Ava_0321 hypothetical protein. (308 aa) |
| | Tery_2502 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: ava:Ava_3732 RNA binding S1. (304 aa) |
| | Tery_2450 | KEGG: xft:PD0409 hypothetical protein. (466 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (601 aa) |
| | Tery_2387 | PFAM: Tetratricopeptide TPR_2; KEGG: ana:all0562 hypothetical protein. (745 aa) |
| | lysS | TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N) nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: syn:slr1550 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (522 aa) |
| | aspS | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. (595 aa) |
| | Tery_2349 | TPR repeat; PFAM: peptidase S1 and S6, chymotrypsin/Hap TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: pmt:PMT0296 TPR repeat. (649 aa) |
| | smpB | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (156 aa) |
| | Tery_2339 | PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: ana:all2248 gas vesicle protein. (266 aa) |
| | Tery_2268 | PFAM: glycosyl transferase, family 2 glycosyl transferase, group 1 TPR repeat Tetratricopeptide TPR_4 Tetratricopeptide TPR_2 Methyltransferase type 11; SMART: Tetratricopeptide region; KEGG: nar:Saro_0724 glycosyl transferase, family 2. (1600 aa) |
| | Tery_1539 | PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_3360 glycosyl transferase, group 1. (360 aa) |
| | Tery_2266 | PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: RNA-processing protein, HAT helix Tetratricopeptide region; KEGG: mba:Mbar_A2604 TPR repeat. (1213 aa) |
| | asnS | TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N) nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: ava:Ava_3630 asparaginyl-tRNA synthetase. (463 aa) |
| | glgA | Glycogen/starch synthases, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (460 aa) |
| | Tery_2124 | PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: syn:slr0769 hypothetical protein. (216 aa) |
| | Tery_2123 | PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: syf:Synpcc7942_0647 hypothetical protein. (219 aa) |
| | Tery_2122 | PFAM: protein of unknown function DUF790; KEGG: ana:all2950 hypothetical protein. (407 aa) |
| | Tery_2120 | Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (288 aa) |
| | Tery_2090 | Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase Penicillin-binding protein, dimerisation domain; KEGG: gvi:gll3425 penicillin-binding protein. (597 aa) |
| | gatA | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (485 aa) |
| | pheT | KEGG: ava:Ava_2221 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit. (817 aa) |
| | Tery_2040 | PFAM: protein of unknown function DUF785; KEGG: cbu:CBU_1601 hypothetical protein. (148 aa) |
| | rimK | SSU ribosomal protein S6P modification protein; TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201 RimK-like ATP-grasp; KEGG: hch:HCH_00778 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase). (299 aa) |
| | Tery_1934 | KEGG: hypothetical protein. (296 aa) |
| | Tery_1338 | Hypothetical protein. (687 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] (601 aa) |
| | efp | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. (185 aa) |
| | rpsB | PFAM: ribosomal protein S2; KEGG: ava:Ava_2061 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (272 aa) |
| | tsf | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (219 aa) |
| | Tery_1098 | PFAM: glycosyl transferase, family 8; KEGG: bfs:BF1557 putative glucosyltransferase. (278 aa) |
| | Tery_1097 | PFAM: glycosyl transferase, family 2; KEGG: ava:Ava_1366 glycosyl transferase, family 2. (326 aa) |
| | Tery_1096 | Conserved hypothetical protein; KEGG: ana:all4442 unknown protein. (534 aa) |
| | infC | Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (178 aa) |
| | Tery_0870 | PFAM: glycosyl transferase, family 39; KEGG: ana:alr3150 hypothetical protein. (493 aa) |
| | def | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (187 aa) |
| | hisS-2 | KEGG: ana:all5012 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S) Anticodon-binding. (467 aa) |
| | rpmF | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: syf:Synpcc7942_0997 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (58 aa) |
| | Tery_0626 | PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: RNA-processing protein, HAT helix Tetratricopeptide region; KEGG: mba:Mbar_A3643 TPR-domain containing protein. (2059 aa) |
| | Tery_0610 | PFAM: glycosyl transferase, family 9; KEGG: ava:Ava_2415 glycosyl transferase, family 9. (321 aa) |
| | hisS | ATP phosphoribosyltransferase regulatory subunit; KEGG: mth:MTH244 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S) Anticodon-binding. (517 aa) |
| | glmU | UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the t [...] (471 aa) |
| | Tery_0554 | PFAM: membrane bound O-acyl transferase, MBOAT; KEGG: ana:alr4864 alginate o-acetyltransferase; Belongs to the membrane-bound acyltransferase family. (482 aa) |
| | rpsU | PFAM: ribosomal protein S21; KEGG: ava:Ava_4447 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (50 aa) |
| | murF | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (468 aa) |
| | Tery_0481 | TPR repeat; PFAM: glycosyl transferase, group 1 TPR repeat Sel1-like repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2; SMART: RNA-processing protein, HAT helix Tetratricopeptide region; KEGG: cch:Cag_0301 TPR repeat. (3145 aa) |
| | rpsJ | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (105 aa) |
| | tuf | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (409 aa) |
| | fusA1 | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] (691 aa) |
| | rpsG | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. (124 aa) |
| | tyrS | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. (405 aa) |
| | rpsD | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (202 aa) |
| | Tery_0317 | KEGG: noc:Noc_2091 hypothetical protein. (361 aa) |
| | Tery_0291 | TPR repeat; PFAM: peptidase S1 and S6, chymotrypsin/Hap TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: tel:tlr1637 unknown protein. (412 aa) |
| | rplS | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (127 aa) |
| | rplK | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | def-2 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (177 aa) |
| | Tery_4950 | PFAM: ErfK/YbiS/YcfS/YnhG; KEGG: ana:all4770 hypothetical protein. (206 aa) |
| | Tery_4945 | PFAM: TPR repeat Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: ava:Ava_0346 TPR repeat. (750 aa) |
| | Tery_4894 | KEGG: ava:Ava_0784 hypothetical protein. (140 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (874 aa) |
| | uppP | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (312 aa) |
| | Tery_4782 | PFAM: protein kinase TPR repeat Tetratricopeptide TPR_2; SMART: Tyrosine protein kinase Serine/threonine protein kinase Tetratricopeptide region; KEGG: cyb:CYB_1515 tetratricopeptide repeat/protein kinase domain protein. (746 aa) |
| | Tery_4781 | PFAM: protein kinase TPR repeat Tetratricopeptide TPR_2; SMART: Serine/threonine protein kinase Tetratricopeptide region; KEGG: cyb:CYB_1515 tetratricopeptide repeat/protein kinase domain protein. (738 aa) |
| | rpmH | PFAM: ribosomal protein L34; KEGG: pma:Pro1299 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (46 aa) |
| | rplA | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (238 aa) |
| | rplJ | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (190 aa) |
| | rplL | LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (133 aa) |
| | Tery_0256 | KEGG: mta:Moth_2225 hypothetical protein. (508 aa) |
