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Tery_2693 Tery_2693 Tery_0096 Tery_0096 ispE ispE Tery_0319 Tery_0319 Tery_0335 Tery_0335 murQ murQ Tery_0531 Tery_0531 Tery_0557 Tery_0557 Tery_0611 Tery_0611 Tery_0636 Tery_0636 Tery_0639 Tery_0639 hemA hemA Tery_1113 Tery_1113 clpS clpS Tery_1127 Tery_1127 Tery_1138 Tery_1138 Tery_1164 Tery_1164 Tery_1179 Tery_1179 Tery_1232 Tery_1232 selO selO Tery_1508 Tery_1508 Tery_1509 Tery_1509 chlL chlL Tery_1567 Tery_1567 Tery_1640 Tery_1640 Tery_1754 Tery_1754 Tery_1776 Tery_1776 Tery_1796 Tery_1796 Tery_1864 Tery_1864 Tery_1897 Tery_1897 Tery_2004 Tery_2004 Tery_2080 Tery_2080 Tery_2082 Tery_2082 Tery_4728 Tery_4728 Tery_4741 Tery_4741 Tery_4810 Tery_4810 Tery_4813 Tery_4813 pdhA pdhA Tery_2732 Tery_2732 Tery_2832 Tery_2832 Tery_3018 Tery_3018 Tery_3130 Tery_3130 Tery_3167 Tery_3167 Tery_3212 Tery_3212 mutS2 mutS2 Tery_3424 Tery_3424 Tery_3466 Tery_3466 Tery_3687 Tery_3687 Tery_3794 Tery_3794 Tery_3799 Tery_3799 kaiC kaiC clpS-2 clpS-2 Tery_3955 Tery_3955 miaA miaA Tery_4103 Tery_4103 nifH nifH Tery_4268 Tery_4268 Tery_4386 Tery_4386 Tery_4427 Tery_4427 Tery_4432 Tery_4432 Tery_4525 Tery_4525 Tery_4536 Tery_4536 Tery_4538 Tery_4538 Tery_4576 Tery_4576 Tery_4609 Tery_4609 Tery_4618 Tery_4618 Tery_4645 Tery_4645 Tery_4652 Tery_4652 Tery_4678 Tery_4678 mtnD mtnD Tery_2665 Tery_2665 petJ petJ Tery_2448 Tery_2448 Tery_2431 Tery_2431 Tery_2335 Tery_2335 Tery_2332 Tery_2332 Tery_2330 Tery_2330 gvpA-2 gvpA-2 gvpA gvpA Tery_2323 Tery_2323 Tery_0012 Tery_0012
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Tery_2693TIGRFAM: eight transmembrane protein EpsH; KEGG: ana:all0497 unknown protein. (297 aa)
Tery_0096PFAM: Methyltransferase type 12; KEGG: bta:613413 histamine N-methyltransferase. (299 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (314 aa)
Tery_0319TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: ava:Ava_0415 nicotinic acid mononucleotide adenyltransferase; Belongs to the NadD family. (196 aa)
Tery_0335PFAM: Haem oxygenase; KEGG: ava:Ava_3767 heme oxygenase. (239 aa)
murQGlucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (307 aa)
Tery_0531KEGG: ana:alr2276 site-specific DNA-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase. (421 aa)
Tery_0557KEGG: ava:Ava_0818 hypothetical protein. (182 aa)
Tery_0611KEGG: ana:all5169 hypothetical protein. (159 aa)
Tery_0636KEGG: ava:Ava_B0313 hypothetical protein. (759 aa)
Tery_0639KEGG: gvi:glr1965 WD-repeat protein. (315 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (431 aa)
Tery_1113Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding DNA photolyase-like; KEGG: ava:Ava_4292 DNA photolyase, FAD-binding. (474 aa)
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (95 aa)
Tery_1127SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: syn:sll0428 hypothetical protein. (303 aa)
Tery_1138C-terminal processing peptidase-2. Serine peptidase. MEROPS family S41A; KEGG: ava:Ava_3440 peptidase S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF peptidase S41; Belongs to the peptidase S41A family. (412 aa)
Tery_1164KEGG: ana:asr0654 hypothetical protein. (64 aa)
Tery_1179PFAM: peptidase M16-like Peptidase M16C associated; KEGG: pca:Pcar_0673 metalloprotease, putative. (987 aa)
Tery_1232PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ava:Ava_2511 pterin-4-alpha-carbinolamine dehydratase. (93 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (474 aa)
Tery_1508KEGG: ava:Ava_0550 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. (110 aa)
Tery_1509Hypothetical protein; KEGG: tel:tll1031 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. (68 aa)
chlLLight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (288 aa)
Tery_1567Ferredoxin thioredoxin reductase, beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. (121 aa)
Tery_1640PFAM: GCN5-related N-acetyltransferase; KEGG: ava:Ava_1482 GCN5-related N-acetyltransferase. (183 aa)
Tery_1754TIGRFAM: methyltransferase FkbM family; PFAM: Methyltransferase type 11 Methyltransferase type 12; KEGG: dde:Dde_2894 methyltransferase FkbM. (488 aa)
Tery_1776PFAM: Methyltransferase type 12. (389 aa)
Tery_1796PFAM: Patatin; KEGG: ava:Ava_0119 patatin. (337 aa)
Tery_1864TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: ana:alr4848 riboflavin kinase/FAD synthase. (368 aa)
Tery_1897KEGG: sma:SAV1399 hypothetical protein. (733 aa)
Tery_2004TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: cyb:CYB_2817 DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. (201 aa)
Tery_2080KEGG: ava:Ava_2917 thymidylate synthase complementing protein ThyX. (73 aa)
Tery_2082Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (458 aa)
Tery_4728PFAM: protein of unknown function DUF1092; KEGG: ava:Ava_2159 protein of unknown function DUF1092. (286 aa)
Tery_4741PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: syn:sll0037 putative sirohydrochlorin cobaltochelatase. (347 aa)
Tery_4810DNA-cytosine methyltransferase; KEGG: cgb:cg1996 modification methylase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase. (379 aa)
Tery_4813PFAM: protein of unknown function DUF185; KEGG: ava:Ava_3205 protein of unknown function DUF185. (397 aa)
pdhAPyruvate dehydrogenase (lipoamide); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (343 aa)
Tery_2732TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ana:alr3086 gluconokinase. (170 aa)
Tery_2832PFAM: protein of unknown function DUF985; KEGG: tel:tll0830 hypothetical protein. (171 aa)
Tery_3018PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: ana:alr4036 hypothetical protein. (201 aa)
Tery_3130Glycine amidinotransferase; KEGG: bja:blr2071 similar to inosamine-phosphate amidinotransferase. (379 aa)
Tery_3167Serine--glyoxylate transaminase; PFAM: aminotransferase, class V; KEGG: tel:tll1465 small subunit of soluble hydrogenase. (385 aa)
Tery_3212PFAM: Carotenoid oxygenase; KEGG: ava:Ava_1236 retinal pigment epithelial membrane protein. (489 aa)
mutS2MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (857 aa)
Tery_3424KEGG: ana:alr4514 hypothetical protein. (106 aa)
Tery_3466PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: syn:sll0191 hypothetical protein. (306 aa)
Tery_3687PFAM: protein of unknown function DUF1092; KEGG: ava:Ava_0136 protein of unknown function DUF1092. (283 aa)
Tery_3794PFAM: Carotenoid oxygenase; KEGG: ava:Ava_3710 retinal pigment epithelial membrane protein. (464 aa)
Tery_3799Glycerate kinase; KEGG: ana:alr2873 hypothetical protein. (356 aa)
kaiCCircadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family. (519 aa)
clpS-2ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (116 aa)
Tery_3955PFAM: cyclase/dehydrase; KEGG: syn:slr0941 hypothetical protein. (152 aa)
miaAtRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (309 aa)
Tery_4103PFAM: beta-lactamase-like; KEGG: ava:Ava_4880 beta-lactamase-like. (539 aa)
nifHNitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (296 aa)
Tery_42682,3-dimethylmalate lyase; KEGG: ava:Ava_4757 putative methylisocitrate lyase. (291 aa)
Tery_4386KEGG: bfr:BF3957 hypothetical protein. (301 aa)
Tery_4427PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ava:Ava_2921 cobalamin (vitamin B12) biosynthesis CbiX protein. (293 aa)
Tery_4432PFAM: protein of unknown function DUF55; KEGG: ana:all0984 hypothetical protein. (151 aa)
Tery_4525DNA-cytosine methyltransferase; KEGG: ngo:NGO1894 putative 5-methylcytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase. (337 aa)
Tery_4536PFAM: Pathogenesis-related transcriptional factor and ERF; KEGG: sha:SH2380 hypothetical protein. (162 aa)
Tery_4538Deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding DNA photolyase-like; KEGG: gvi:glr0835 probable bacterial cryptochrome. (498 aa)
Tery_4576PFAM: MOSC domain containing protein; KEGG: rpa:RPA4434 MOSC domain. (267 aa)
Tery_4609KEGG: ava:Ava_B0234 hypothetical protein. (243 aa)
Tery_4618PFAM: cytochrome c, class I; KEGG: ana:all0161 cytochrome c6. (111 aa)
Tery_4645PFAM: Transketolase, central region; KEGG: ava:Ava_4264 transketolase, central region. (736 aa)
Tery_4652KEGG: ngo:NGO1991 DNA (cytosine-5-)-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase. (413 aa)
Tery_4678TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: xft:PD0577 site-specific DNA-methyltransferase. (345 aa)
mtnDAcireductone dioxygenase, ARD; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (181 aa)
Tery_2665KEGG: ana:alr2783 unknown protein. (379 aa)
petJCytochrome c, class I; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (131 aa)
Tery_2448TIGRFAM: conserved hypothetical protein; KEGG: ana:all5029 hypothetical protein. (146 aa)
Tery_2431KEGG: ana:asr2994 hypothetical protein. (90 aa)
Tery_2335Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (104 aa)
Tery_2332PFAM: gas vesicle protein GVPa Gas vesicle K; KEGG: ana:all2249 gas vesicle protein. (153 aa)
Tery_2330Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (103 aa)
gvpA-2Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (72 aa)
gvpAGas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (75 aa)
Tery_2323PFAM: gas vesicle protein GVPa; KEGG: plt:Plut_0686 gas vesicle synthesis protein GvpA. (54 aa)
Tery_0012Helicase-like; KEGG: ava:Ava_C0236 helicase-like. (1248 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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