STRINGSTRING
Tery_0033 Tery_0033 Tery_0349 Tery_0349 Tery_0366 Tery_0366 Tery_1070 Tery_1070 Tery_1079 Tery_1079 thf1 thf1 Tery_1363 Tery_1363 Tery_1458 Tery_1458 Tery_1459 Tery_1459 Tery_1794 Tery_1794 tatC tatC Tery_1920 Tery_1920 Tery_1927 Tery_1927 Tery_2000 Tery_2000 Tery_2272 Tery_2272 Tery_2779 Tery_2779 Tery_2780 Tery_2780 Tery_2781 Tery_2781 potA potA potA-2 potA-2 tatA tatA Tery_3053 Tery_3053 Tery_3219 Tery_3219 Tery_3355 Tery_3355 Tery_3358 Tery_3358 Tery_3534 Tery_3534 Tery_3537 Tery_3537 Tery_3726 Tery_3726 Tery_4153 Tery_4153 Tery_4198 Tery_4198 Tery_4719 Tery_4719 Tery_4721 Tery_4721 Tery_4953 Tery_4953 Tery_4993 Tery_4993
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_0033PFAM: protein of unknown function DUF477; KEGG: ava:Ava_0806 protein of unknown function DUF477. (242 aa)
Tery_0349KEGG: ava:Ava_4474 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (506 aa)
Tery_0366TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ana:all8089 putative phosphonate transport system substrate-binding protein. (298 aa)
Tery_1070Assimilatory nitrate reductase (ferredoxin) precursor; PFAM: molybdopterin oxidoreductase molydopterin dinucleotide-binding region molybdopterin oxidoreductase Fe4S4 region; KEGG: ava:Ava_4544 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (734 aa)
Tery_1079PFAM: ABC-2 type transporter; KEGG: ava:Ava_0192 ABC-2. (296 aa)
thf1Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis. (239 aa)
Tery_1363PFAM: ABC-2 type transporter; KEGG: syf:Synpcc7942_1126 ABC transporter permease protein. (284 aa)
Tery_1458PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: plu:plu1281 glycine betaine-binding periplasmic protein precursor ProX. (338 aa)
Tery_1459PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: plu:plu1281 glycine betaine-binding periplasmic protein precursor ProX. (336 aa)
Tery_1794KEGG: ana:all1355 hypothetical protein. (147 aa)
tatCSec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. (285 aa)
Tery_1920PFAM: extracellular solute-binding protein, family 5; KEGG: sme:SMb20476 putative ABC transporter periplasmic dipeptide-binding protein. (607 aa)
Tery_1927KEGG: ava:Ava_3160 hemolysin-type calcium-binding region. (108 aa)
Tery_2000TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_0738 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine. (403 aa)
Tery_2272PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_1638 ABC transporter-like. (242 aa)
Tery_2779PFAM: Ion transport protein Ion transport 2; KEGG: deh:cbdb_A360 cation channel family protein. (357 aa)
Tery_2780PFAM: ABC transporter related; SMART: ATPase; KEGG: ava:Ava_1753 ABC transporter-like. (244 aa)
Tery_2781TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: syn:sll0384 ABC-type cobalt transport system permease protein. (262 aa)
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (381 aa)
potA-2Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (381 aa)
tatASec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (87 aa)
Tery_3053PFAM: protein of unknown function DUF140; KEGG: ava:Ava_1687 protein of unknown function DUF140; Belongs to the MlaE permease family. (249 aa)
Tery_3219PFAM: ABC transporter related; SMART: ATPase; KEGG: ana:all3575 putative manganese transport system ATP-binding protein. (249 aa)
Tery_3355PFAM: extracellular solute-binding protein, family 5; KEGG: ana:alr0140 oligopeptide transport system substrate-binding protein. (551 aa)
Tery_3358ABC-3; PFAM: transport system permease protein ABC-3; KEGG: ava:Ava_1599 ABC-3. (297 aa)
Tery_3534TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: ava:Ava_2477 periplasmic phosphate binding protein; Belongs to the PstS family. (361 aa)
Tery_3537TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: ava:Ava_2477 periplasmic phosphate binding protein; Belongs to the PstS family. (358 aa)
Tery_3726KEGG: ava:Ava_0523 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (346 aa)
Tery_4153TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ana:alr2738 putative phosphonate transport system substrate-binding protein. (317 aa)
Tery_4198PFAM: RNA-binding S4; KEGG: ava:Ava_1012 RNA-binding S4. (259 aa)
Tery_4719PFAM: extracellular solute-binding protein, family 5; KEGG: ana:alr3884 oligopeptide transport system substrate-binding protein. (591 aa)
Tery_4721KEGG: tel:tll0810 periplasmic oligopeptide-binding protein of oligopeptide ABC transporter. (96 aa)
Tery_4953ABC-3; PFAM: ABC-3; KEGG: ana:all0830 putative zinc transport system permease protein. (272 aa)
Tery_4993TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: tbd:Tbd_2300 phosphonate-binding periplasmic protein. (305 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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