STRINGSTRING
Tery_3188 Tery_3188 Tery_4395 Tery_4395 Tery_2260 Tery_2260 Tery_2112 Tery_2112 Tery_1856 Tery_1856 Tery_1537 Tery_1537 cugP cugP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_3188PFAM: transferase hexapeptide repeat Nucleotidyl transferase phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: ava:Ava_0182 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domains I and III. (843 aa)
Tery_4395KEGG: ava:Ava_2020 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: transferase hexapeptide repeat Nucleotidyl transferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (428 aa)
Tery_2260TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: tbd:Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase. (258 aa)
Tery_2112UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; KEGG: ana:all3274 UTP-glucose-1-phosphate uridylyltransferase. (294 aa)
Tery_1856Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; KEGG: ava:Ava_2680 nucleotidyl transferase. (349 aa)
Tery_1537TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: ava:Ava_3356 glucose-1-phosphate thymidylyltransferase, short form. (364 aa)
cugPNucleotidyl transferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate. (388 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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