STRINGSTRING
Tery_4515 Tery_4515 Tery_4465 Tery_4465 Tery_0838 Tery_0838 Tery_1234 Tery_1234 Tery_4466 Tery_4466
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_4515PFAM: S-layer-like region Carbohydrate-selective porin OprB; KEGG: ava:Ava_4059 S-layer region-like; Belongs to the OprB family. (589 aa)
Tery_4465PFAM: S-layer-like region Carbohydrate-selective porin OprB; KEGG: ana:alr2231 hypothetical protein; Belongs to the OprB family. (572 aa)
Tery_0838PFAM: S-layer-like region Carbohydrate-selective porin OprB; KEGG: ana:alr2231 hypothetical protein; Belongs to the OprB family. (550 aa)
Tery_1234PFAM: S-layer-like region Carbohydrate-selective porin OprB; KEGG: ava:Ava_2510 S-layer region-like; Belongs to the OprB family. (639 aa)
Tery_4466PFAM: S-layer-like region Carbohydrate-selective porin OprB; KEGG: ana:alr2231 hypothetical protein; Belongs to the OprB family. (491 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (18%) [HD]