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Tery_4349 Tery_4349 Tery_4347 Tery_4347 fdxH fdxH Tery_3956 Tery_3956 Tery_2584 Tery_2584 ychF ychF Tery_0916 Tery_0916 Tery_2653 Tery_2653 Tery_3726 Tery_3726 Tery_0914 Tery_0914 Tery_4539 Tery_4539 Tery_4504 Tery_4504 Tery_0754 Tery_0754 Tery_0915 Tery_0915
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_4349TIGRFAM: MoaD family protein; PFAM: thiamineS; KEGG: ava:Ava_4953 ThiamineS. (91 aa)
Tery_4347PFAM: thiamineS; KEGG: ava:Ava_1302 ThiamineS. (92 aa)
fdxHTIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ana:all1430 heterocyst ferredoxin. (104 aa)
Tery_3956PFAM: ferredoxin; KEGG: syn:ssr1041 NAD-reducing hydrogenase gamma subunit homolog. (77 aa)
Tery_2584TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS; KEGG: ava:Ava_5046 hypothetical protein. (80 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa)
Tery_0916TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: gvi:gsr3623 ferredoxin. (98 aa)
Tery_2653(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (750 aa)
Tery_3726KEGG: ava:Ava_0523 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (346 aa)
Tery_0914TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: gvi:gsr3623 ferredoxin. (96 aa)
Tery_4539TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ava:Ava_0568 ferredoxin (2Fe-2S). (111 aa)
Tery_4504PFAM: ferredoxin; KEGG: tel:tll1529 probable ferredoxin. (102 aa)
Tery_0754TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: ava:Ava_0981 ferredoxin (2Fe-2S). (122 aa)
Tery_0915TIGRFAM: ferredoxin [2Fe-2S]; PFAM: ferredoxin; KEGG: cyb:CYB_1598 ferredoxin, 2Fe-2S. (100 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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