STRINGSTRING
Tery_0801 Tery_0801 Tery_0130 Tery_0130 Tery_1451 Tery_1451 Tery_1452 Tery_1452 Tery_1828 Tery_1828 Tery_2769 Tery_2769 Tery_3674 Tery_3674 Tery_4718 Tery_4718 Tery_5073 Tery_5073
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_0801KEGG: cpe:CPE1341 probable galactoside ABC transporter. (342 aa)
Tery_0130KEGG: ava:Ava_4361 extracellular ligand-binding receptor. (423 aa)
Tery_1451PFAM: pentapeptide repeat periplasmic binding protein/LacI transcriptional regulator; KEGG: mba:Mbar_A0710 hypothetical protein. (525 aa)
Tery_1452KEGG: hch:HCH_05830 ABC-type branched-chain amino acid transport system, periplasmic component. (458 aa)
Tery_1828PFAM: Extracellular ligand-binding receptor; KEGG: ana:alr4531 putative branched-chain amino acid transport system substrate-binding protein. (512 aa)
Tery_2769PFAM: Extracellular ligand-binding receptor; KEGG: ana:alr0344 serine/threonine kinase. (981 aa)
Tery_3674PFAM: basic membrane lipoprotein; KEGG: ana:alr5361 putative simple sugar transport system substrate-binding protein. (355 aa)
Tery_4718PFAM: Extracellular ligand-binding receptor Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: cya:CYA_0224 hydrophobic amino acid uptake ABC transporter (HAAT) family, amino acid-binding protein. (1007 aa)
Tery_5073ABC-type branched-chain amino acid transport systems periplasmic component-like; KEGG: ana:alr0344 serine/threonine kinase. (599 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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