STRINGSTRING
Tery_3933 Tery_3933 Tery_2810 Tery_2810 Tery_2857 Tery_2857 Tery_3350 Tery_3350 Tery_3770 Tery_3770 Tery_3863 Tery_3863 Tery_3924 Tery_3924 Tery_3997 Tery_3997 Tery_4454 Tery_4454 Tery_4718 Tery_4718 Tery_1787 Tery_1787 Tery_1784 Tery_1784 Tery_2107 Tery_2107 Tery_2556 Tery_2556
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tery_3933KEGG: ava:Ava_1557 hypothetical protein. (479 aa)
Tery_2810Hypothetical protein; KEGG: ava:Ava_1356 NB-ARC. (482 aa)
Tery_2857PFAM: protein kinase adenylyl cyclase class-3/4/guanylyl cyclase GAF; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ana:alr2258 serine/threonine kinase with two-component sensor domain. (1805 aa)
Tery_3350PFAM: GUN4-like; KEGG: rru:Rru_A3262 hypothetical protein. (979 aa)
Tery_3770KEGG: ava:Ava_1840 hypothetical protein. (455 aa)
Tery_3863PFAM: protein kinase GAF; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ava:Ava_0083 serine/threonine protein kinase and signal transduction histidine kinase (STHK) with GAF sensor. (1932 aa)
Tery_3924KEGG: ava:Ava_1557 hypothetical protein. (438 aa)
Tery_3997KEGG: ava:Ava_2892 hypothetical protein. (441 aa)
Tery_4454KEGG: ana:alr0841 unknown protein. (917 aa)
Tery_4718PFAM: Extracellular ligand-binding receptor Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: cya:CYA_0224 hydrophobic amino acid uptake ABC transporter (HAAT) family, amino acid-binding protein. (1007 aa)
Tery_1787KEGG: ava:Ava_3080 hypothetical protein. (642 aa)
Tery_1784KEGG: ava:Ava_4445 hypothetical protein. (370 aa)
Tery_2107PFAM: protein of unknown function RIO1 protein kinase; SMART:Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ana:all1625 serine/threonine kinase with two-component sensor domain. (670 aa)
Tery_2556PFAM: protein kinase GAF ATP-binding region, ATPase-like histidine kinase A-like; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: ana:all3557 serine/threonine kinase with two-component sensor domain. (1811 aa)
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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