STRINGSTRING
AJR18541.1 AJR18541.1 AJR18115.1 AJR18115.1 AIY15580.1 AIY15580.1 AIY15621.1 AIY15621.1 AIY15689.1 AIY15689.1 AIY15777.1 AIY15777.1 dcm dcm AIY15820.1 AIY15820.1 mhpB mhpB AIY15981.2 AIY15981.2 hemA hemA AJR18116.1 AJR18116.1 AIY16226.1 AIY16226.1 AIY16334.1 AIY16334.1 ispE ispE miaA miaA AIY16406.2 AIY16406.2 AIY16488.1 AIY16488.1 AIY19770.2 AIY19770.2 AIY16624.1 AIY16624.1 AIY16661.1 AIY16661.1 clpS clpS AIY16904.1 AIY16904.1 AIY19467.1 AIY19467.1 AJR18837.1 AJR18837.1 AIY19295.1 AIY19295.1 pdhA pdhA AJR18749.1 AJR18749.1 AJR18746.1 AJR18746.1 AIY20124.2 AIY20124.2 AIY18795.1 AIY18795.1 AIY20104.2 AIY20104.2 hrpA hrpA AIY18538.1 AIY18538.1 AIY17295.1 AIY17295.1 AIY17378.1 AIY17378.1 AJR18406.1 AJR18406.1 gvpA1 gvpA1 AIY17463.1 AIY17463.1 AIY19912.2 AIY19912.2 gvpK gvpK AIY17483.1 AIY17483.1 AIY17805.1 AIY17805.1 AIY19976.2 AIY19976.2 AIY17950.1 AIY17950.1 nadD nadD AIY16975.1 AIY16975.1 AIY16991.1 AIY16991.1 AIY17109.2 AIY17109.2 nfo nfo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR18541.1Acetoin dehydrogenase E1 component alpha-subunit. (323 aa)
AJR18115.1DNA-cytosine methyltransferase. (134 aa)
AIY15580.1DNA-cytosine methyltransferase. (379 aa)
AIY15621.1Lignostilbene-alpha,beta-dioxygenase-related enzyme. (505 aa)
AIY15689.1Hypothetical protein. (571 aa)
AIY15777.1Sirohydrochlorin ferrochelatase. (229 aa)
dcmModification methylase ScrFIA; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (597 aa)
AIY15820.1Phage protein. (122 aa)
mhpB3-carboxyethylcatechol 2,3-dioxygenase. (316 aa)
AIY15981.2Hypothetical protein. (177 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (435 aa)
AJR18116.1DNA-cytosine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (218 aa)
AIY16226.1Hypothetical protein. (317 aa)
AIY16334.1Hypothetical protein. (593 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (299 aa)
miaAtRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (333 aa)
AIY16406.2Gluconokinase. (160 aa)
AIY16488.1Chromosome segregation ATPase. (405 aa)
AIY19770.2NADPH-dependent F420 reductase. (233 aa)
AIY16624.1Putative dioxygenase. (110 aa)
AIY16661.1NADPH-dependent F420 reductase. (230 aa)
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (102 aa)
AIY16904.1Cupin superfamily protein. (143 aa)
AIY19467.1Pterin-4-alpha-carbinolamine dehydratase. (219 aa)
AJR18837.1Hypothetical protein. (87 aa)
AIY19295.1Uncharacterized protein. (120 aa)
pdhAPyruvate dehydrogenase E1 component alpha subunit. (377 aa)
AJR18749.1Glycosyltransferase 28, C-terminal domain. (164 aa)
AJR18746.1Hypothetical protein. (404 aa)
AIY20124.2Thiosulfate sulfurtransferase, rhodanese. (153 aa)
AIY18795.1Hypothetical protein. (269 aa)
AIY20104.2Hypothetical protein. (147 aa)
hrpAATP-dependent helicase hrpA. (1278 aa)
AIY18538.1Heme oxygenase. (227 aa)
AIY17295.1Hypothetical protein. (99 aa)
AIY17378.1DNA-3-methyladenine glycosylase II; Belongs to the DNA glycosylase MPG family. (199 aa)
AJR18406.1Hypothetical protein. (323 aa)
gvpA1Gas vesicle structural protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (140 aa)
AIY17463.1Putative gas vesicle synthesis protein. (111 aa)
AIY19912.2Gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (120 aa)
gvpKPutative gas vesicle synthesis protein. (112 aa)
AIY17483.1Hypothetical protein. (246 aa)
AIY17805.1Sirohydrochlorin ferrochelatase. (247 aa)
AIY19976.2Hypothetical protein. (276 aa)
AIY17950.1NADPH-dependent F420 reductase. (213 aa)
nadDNicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (211 aa)
AIY16975.1Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (450 aa)
AIY16991.1Hypothetical protein. (159 aa)
AIY17109.2Riboflavin kinase; Belongs to the ribF family. (313 aa)
nfoEndonuclease IV. (265 aa)
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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