STRINGSTRING
paaH paaH cobB_2 cobB_2 fadB fadB AIY17083.1 AIY17083.1 cobB_1 cobB_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
paaH3-hydroxybutyryl-CoA dehydrogenase. (284 aa)
cobB_2NAD-dependent protein deacetylase of SIR2 family; Belongs to the sirtuin family. Class III subfamily. (230 aa)
fadBShort chain enoyl-CoA hydratase [isoleucine degradation]/3-hydroxyacyl-CoA dehydrogenase. (728 aa)
AIY17083.13-hydroxybutyryl-CoA dehydrogenase. (390 aa)
cobB_1NAD-dependent protein deacetylase of SIR2 family. (290 aa)
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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