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AIY15731.1 AIY15731.1 AJR17960.1 AJR17960.1 AIY15653.2 AIY15653.2 rbpA_1 rbpA_1 AIY17514.2 AIY17514.2 AIY17750.2 AIY17750.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIY15731.1Alkane-1 monooxygenase. (485 aa)
AJR17960.1RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family. (359 aa)
AIY15653.2Alkane-1 monooxygenase. (643 aa)
rbpA_1Putative electron transport protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. (120 aa)
AIY17514.2Hypothetical protein. (86 aa)
AIY17750.2Hypothetical protein. (72 aa)
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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