STRINGSTRING
fadB fadB paaG_1 paaG_1 paaG_3 paaG_3 AIY16637.1 AIY16637.1 fadA_2 fadA_2 AIY17410.1 AIY17410.1 AIY17619.1 AIY17619.1 AIY17646.1 AIY17646.1 AIY18813.1 AIY18813.1 AIY18815.1 AIY18815.1 paaG_5 paaG_5 AIY20186.2 AIY20186.2 hmgL hmgL AIY20228.2 AIY20228.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fadBShort chain enoyl-CoA hydratase [isoleucine degradation]/3-hydroxyacyl-CoA dehydrogenase. (728 aa)
paaG_1Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (272 aa)
paaG_3Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
AIY16637.1Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
fadA_2acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
AIY17410.1Short-chain dehydrogenase/reductase SDR. (279 aa)
AIY17619.1enoyl-CoA hydratase echA19. (270 aa)
AIY17646.1enoyl-CoA hydratase echA20. (253 aa)
AIY18813.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
AIY18815.1enoyl-CoA hydratase echA1; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)
paaG_5enoyl-CoA hydratase. (291 aa)
AIY20186.2Enoyl-CoA hydratase. (208 aa)
hmgLHydroxymethylglutaryl-CoA lyase. (315 aa)
AIY20228.23-hydroxyisobutyryl-CoA hydrolase. (338 aa)
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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