STRINGSTRING
dapB_2 dapB_2 rocD rocD AIY15742.1 AIY15742.1 AIY16012.1 AIY16012.1 putA_1 putA_1 proC proC AIY16193.1 AIY16193.1 AIY16271.1 AIY16271.1 AIY16546.1 AIY16546.1 AIY16631.1 AIY16631.1 AIY16632.1 AIY16632.1 AIY19779.2 AIY19779.2 AIY16771.1 AIY16771.1 speB_1 speB_1 putA_2 putA_2 putA_3 putA_3 speB_2 speB_2 AIY17447.2 AIY17447.2 AIY19931.2 AIY19931.2 AIY17945.1 AIY17945.1 AIY18136.2 AIY18136.2 AIY18141.1 AIY18141.1 proA proA AIY18192.1 AIY18192.1 AIY18294.1 AIY18294.1 proB proB AIY18546.1 AIY18546.1 AIY20103.2 AIY20103.2 AIY18754.1 AIY18754.1 AIY18981.1 AIY18981.1 AIY20162.2 AIY20162.2 AIY19191.1 AIY19191.1 AIY20174.2 AIY20174.2 AIY19251.1 AIY19251.1 dapB_3 dapB_3 AIY19453.1 AIY19453.1 AIY19454.2 AIY19454.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dapB_2Hypothetical protein. (350 aa)
rocDOrnithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (423 aa)
AIY15742.1Amine oxidase [flavin-containing]. (498 aa)
AIY16012.1Diacylglycerol kinase. (371 aa)
putA_1Proline dehydrogenase (Proline oxidase). (275 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (267 aa)
AIY16193.1Putative amidase; Belongs to the amidase family. (465 aa)
AIY16271.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (486 aa)
AIY16546.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (485 aa)
AIY16631.1Amidase; Belongs to the amidase family. (466 aa)
AIY16632.1N-methylhydantoinase A. (692 aa)
AIY19779.2N-methylhydantoinase B. (493 aa)
AIY16771.1Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. (491 aa)
speB_1Agmatinase; Belongs to the arginase family. (327 aa)
putA_2Proline dehydrogenase (Proline oxidase). (307 aa)
putA_3Delta-1-pyrroline-5-carboxylate dehydrogenase. (545 aa)
speB_2Agmatinase; Belongs to the arginase family. (312 aa)
AIY17447.2Dihydrodipicolinate reductase. (360 aa)
AIY19931.2Agmatinase; Belongs to the arginase family. (302 aa)
AIY17945.1Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. (471 aa)
AIY18136.2Amine oxidase [flavin-containing]. (449 aa)
AIY18141.1Acetolactate synthase large subunit; Belongs to the TPP enzyme family. (539 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (381 aa)
AIY18192.1Aminohydrolase; Belongs to the amidase family. (468 aa)
AIY18294.1Putative amidase; Belongs to the amidase family. (475 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (371 aa)
AIY18546.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
AIY20103.2Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (409 aa)
AIY18754.1Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family. (503 aa)
AIY18981.1Cytosine deaminase. (152 aa)
AIY20162.2Amidase clustered with urea ABC transporter and nitrile hydratase functions; Belongs to the amidase family. (514 aa)
AIY19191.1Creatinine amidohydrolase. (227 aa)
AIY20174.2Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (491 aa)
AIY19251.1Cytosine deaminase. (415 aa)
dapB_3Dihydrodipicolinate reductase. (352 aa)
AIY19453.1N-methylhydantoinase B. (624 aa)
AIY19454.2N-methylhydantoinase A. (682 aa)
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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