STRINGSTRING
HEAR3394 HEAR3394 HEAR3395 HEAR3395 HEAR3396 HEAR3396 HEAR3397 HEAR3397 piuC piuC HEAR3400 HEAR3400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEAR3394Conserved hypothetical protein, putative membrane; Homologs of previously reported genes of unknown function. (212 aa)
HEAR3395Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (170 aa)
HEAR3396Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (285 aa)
HEAR3397Putative Thiamine biosynthesis lipoprotein ApbE-like precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. (344 aa)
piuCPKHD-type hydroxylase PiuC (Iron-uptake factor PiuC); Function of strongly homologous gene; enzyme. (225 aa)
HEAR3400TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor. (759 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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