STRINGSTRING
HEAR0032 HEAR0032 HEAR0087 HEAR0087 HEAR0088 HEAR0088 HEAR0089 HEAR0089 HEAR0090 HEAR0090 HEAR0091 HEAR0091 HEAR0092 HEAR0092 HEAR0094 HEAR0094 dsbA dsbA HEAR0096 HEAR0096 HEAR0157 HEAR0157 HEAR0158 HEAR0158 HEAR0348 HEAR0348 HEAR0349 HEAR0349 HEAR0350 HEAR0350 HEAR0352 HEAR0352 oxc oxc frc1 frc1 frc2 frc2 HEAR0356 HEAR0356 HEAR0385 HEAR0385 HEAR0386 HEAR0386 HEAR0387 HEAR0387 HEAR0388 HEAR0388 HEAR0389 HEAR0389 HEAR0390 HEAR0390 uspA uspA HEAR0392 HEAR0392 HEAR0415 HEAR0415 HEAR0416 HEAR0416 HEAR0417 HEAR0417 HEAR0659 HEAR0659 HEAR0738 HEAR0738 HEAR0769 HEAR0769 HEAR0771 HEAR0771 HEAR0818 HEAR0818 fpr fpr HEAR0931 HEAR0931 HEAR1098 HEAR1098 HEAR1182 HEAR1182 HEAR1183 HEAR1183 HEAR1370 HEAR1370 HEAR1423 HEAR1423 HEAR1424 HEAR1424 HEAR1425 HEAR1425 HEAR1426 HEAR1426 HEAR1450 HEAR1450 HEAR1451 HEAR1451 fmdA fmdA HEAR1455 HEAR1455 HEAR1456 HEAR1456 HEAR1457 HEAR1457 HEAR1458 HEAR1458 HEAR1459 HEAR1459 HEAR1461 HEAR1461 HEAR1504 HEAR1504 HEAR1505 HEAR1505 HEAR1507 HEAR1507 HEAR1513 HEAR1513 HEAR1724 HEAR1724 HEAR1728 HEAR1728 HEAR1832 HEAR1832 HEAR2343 HEAR2343 HEAR2344 HEAR2344 HEAR2346 HEAR2346 HEAR2347 HEAR2347 HEAR2348 HEAR2348 sorA sorA HEAR2350 HEAR2350 HEAR2351 HEAR2351 HEAR2386 HEAR2386 HEAR2459 HEAR2459 HEAR2460 HEAR2460 HEAR2461 HEAR2461 braG1 braG1 braF1 braF1 HEAR2464 HEAR2464 HEAR2465 HEAR2465 HEAR2674 HEAR2674 HEAR2675 HEAR2675 HEAR2677 HEAR2677 HEAR2678 HEAR2678 braG2 braG2 HEAR2680 HEAR2680 HEAR2681 HEAR2681 HEAR2682 HEAR2682 HEAR2683 HEAR2683 HEAR2718 HEAR2718 HEAR2719 HEAR2719 HEAR2722 HEAR2722 HEAR2724 HEAR2724 HEAR2725 HEAR2725 HEAR2726 HEAR2726 HEAR2727 HEAR2727 HEAR2728 HEAR2728 HEAR2729 HEAR2729 HEAR2943 HEAR2943 HEAR3091 HEAR3091 HEAR3092 HEAR3092 HEAR3093 HEAR3093 HEAR3094 HEAR3094 HEAR3095 HEAR3095 HEAR3182 HEAR3182 HEAR3183 HEAR3183 insI1 insI1 insI2 insI2 HEAR3217 HEAR3217 HEAR3234 HEAR3234 HEAR3240 HEAR3240 HEAR3241 HEAR3241 HEAR3242 HEAR3242 HEAR3249 HEAR3249 HEAR3251 HEAR3251 amaB amaB HEAR3253 HEAR3253 braG3 braG3 HEAR3255 HEAR3255 HEAR3256 HEAR3256 HEAR3257 HEAR3257 HEAR3258 HEAR3258 HEAR3278 HEAR3278 HEAR3324 HEAR3324 HEAR3325 HEAR3325 HEAR3334 HEAR3334 HEAR3336 HEAR3336 uxaA uxaA HEAR3340 HEAR3340 HEAR3341 HEAR3341 HEAR3346 HEAR3346
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEAR0032Putative 4-oxalocrotonate tautomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 4-oxalocrotonate tautomerase family. (61 aa)
HEAR0087Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (249 aa)
HEAR0088Putative alpha/beta hydrolase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (247 aa)
HEAR0089Putative alcohol dehydrogenase, class IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (412 aa)
HEAR0090Putative transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (460 aa)
HEAR0091Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (257 aa)
HEAR0092Hypothetical protein; No homology to any previously reported sequences. (63 aa)
HEAR0094Conserved hypothetical protein, putative cell division protein; Homologs of previously reported genes of unknown function. (206 aa)
dsbAThiol:disulfide interchange protein dsbA precursor; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (219 aa)
HEAR0096Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)
HEAR0157Putative SAM-dependent methyltransferase with RNA binding site (partial); Gene remnant; putative enzyme. (339 aa)
HEAR0158Putative Sulfate permease and related transporter (MFS superfamily); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (390 aa)
HEAR0348Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (342 aa)
HEAR0349Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (173 aa)
HEAR0350Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (509 aa)
HEAR0352Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (202 aa)
oxcoxalyl-CoA decarboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the TPP enzyme family. (570 aa)
frc1Formyl-coenzyme A transferase (Formyl-CoA transferase); Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. (419 aa)
frc2Formyl-coenzyme A transferase (Formyl-CoA transferase); Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily. (416 aa)
HEAR0356Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (380 aa)
HEAR0385Putative enzyme involved in biosynthesis of extracellular polysaccharides; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (115 aa)
HEAR0386Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (235 aa)
HEAR0387Putative ABC-type branched-chain amino acid transport systems, ATPase component LivG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (255 aa)
HEAR0388Putative ABC-type branched-chain amino acid transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
HEAR0389Putative Branched-chain amino acid ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
HEAR0390Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (429 aa)
uspAUniversal stress protein UspA; Function of strongly homologous gene; cell process. (147 aa)
HEAR0392Hypothetical protein; No homology to any previously reported sequences. (56 aa)
HEAR0415Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (325 aa)
HEAR0416Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (153 aa)
HEAR0417Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (500 aa)
HEAR0659Transposase IS21 family (partial); Gene remnant; extrachromosomal origin. (40 aa)
HEAR0738Putative ABC-type branched-chain amino acid transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (381 aa)
HEAR0769Putative transcriptional regulator (LysR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. (305 aa)
HEAR0771Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (336 aa)
HEAR0818Putative transcriptional regulator (IclR family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (245 aa)
fprferredoxin--NADP+ reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (259 aa)
HEAR0931Hypothetical protein; No homology to any previously reported sequences. (63 aa)
HEAR1098Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (373 aa)
HEAR1182Putative Transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (248 aa)
HEAR1183Putative metal-dependent enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (197 aa)
HEAR1370Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (134 aa)
HEAR1423Conserved hypothetical protein, putative 4-oxalocrotonate tautomerase; Homologs of previously reported genes of unknown function. (129 aa)
HEAR1424Putative Bacterial regulatory protein, MarR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (144 aa)
HEAR1425Oxidoreductase, 2OG-Fe(II) oxygenase family; Function of strongly homologous gene; enzyme. (228 aa)
HEAR1426Hypothetical protein; No homology to any previously reported sequences. (47 aa)
HEAR1450Putative transporter protein, AmiS/UreI family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (171 aa)
HEAR1451Putative regulatory protein fmdB; Function of strongly homologous gene; putative regulator. (114 aa)
fmdAFormamidase (Formamide amidohydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (410 aa)
HEAR1455Two-component response regulator, LuxR family; Function of strongly homologous gene; regulator. (315 aa)
HEAR1456Hypothetical protein; No homology to any previously reported sequences. (46 aa)
HEAR1457Putative transcription elongation factor GreA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (139 aa)
HEAR1458Hypothetical protein; No homology to any previously reported sequences. (51 aa)
HEAR1459Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (241 aa)
HEAR1461Conserved hypothetical protein, putative SAM-dependent methyltransferase; Homologs of previously reported genes of unknown function. (202 aa)
HEAR1504Putative Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S11 family. (274 aa)
HEAR1505Hypothetical protein; No homology to any previously reported sequences. (82 aa)
HEAR1507Putative alpha/beta-Hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (230 aa)
HEAR1513Putative Universal stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (145 aa)
HEAR1724Conserved hypothetical protein (N part); Gene remnant. (86 aa)
HEAR1728Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (387 aa)
HEAR1832Putative transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (436 aa)
HEAR2343Hypothetical protein; No homology to any previously reported sequences. (185 aa)
HEAR2344Conserved hypothetical protein, putative hemerythrin binding domain; Homologs of previously reported genes of unknown function. (154 aa)
HEAR2346Hypothetical protein; No homology to any previously reported sequences. (60 aa)
HEAR2347Putative universel stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (143 aa)
HEAR2348Putative Sulfite:cytochrome c oxidoreductase subunit B SorB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (104 aa)
sorASulfite:cytochrome c oxidoreductase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (416 aa)
HEAR2350Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (298 aa)
HEAR2351Putative universel stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (171 aa)
HEAR2386Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (325 aa)
HEAR2459Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (232 aa)
HEAR2460Gamma-glutamyltransferase; Function of strongly homologous gene; enzyme. (531 aa)
HEAR2461Putative transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (437 aa)
braG1High-affinity branched-chain amino acid transport ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. (241 aa)
braF1High-affinity branched-chain amino acid transport ATP-binding protein BraF; Function of homologous gene experimentally demonstrated in an other organism; transporter. (260 aa)
HEAR2464Putative high-affinity branched-chain amino acid transport system permease protein BraE/LivM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (404 aa)
HEAR2465Putative high-affinity branched-chain amino acid transport system permease protein BraD/LivH-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
HEAR2674Putative gamma-glutamyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (565 aa)
HEAR2675Hypothetical protein; No homology to any previously reported sequences. (41 aa)
HEAR2677Putative cobalamin synthesis CobW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (382 aa)
HEAR2678Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (233 aa)
braG2High-affinity branched-chain amino acid transport ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. (243 aa)
HEAR2680Putative high-affinity branched-chain amino acid transport ATP-binding protein BraF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (608 aa)
HEAR2681Putative high-affinity branched-chain amino acid transport system permease protein LivH/BraD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
HEAR2682Putative leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (397 aa)
HEAR2683Putative regulatory proteins IclR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (285 aa)
HEAR2718Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (172 aa)
HEAR2719Hypothetical protein; No homology to any previously reported sequences. (64 aa)
HEAR2722Putative formyl-coenzyme A transferase (Formyl-CoA transferase) Frc; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the CoA-transferase III family. (400 aa)
HEAR2724Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (380 aa)
HEAR2725Hypothetical protein; No homology to any previously reported sequences. (74 aa)
HEAR2726Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (333 aa)
HEAR2727Conserved hypothetical membrane protein; Homologs of previously reported genes of unknown function. (172 aa)
HEAR2728Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (506 aa)
HEAR2729Putative GntR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (247 aa)
HEAR2943Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (394 aa)
HEAR3091Conserved hypothetical protein, putative membrane protein; Homologs of previously reported genes of unknown function. (236 aa)
HEAR3092Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (807 aa)
HEAR3093Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (64 aa)
HEAR3094Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (69 aa)
HEAR3095Conserved hypothetical protein, putative acetamidase/formamidase; Homologs of previously reported genes of unknown function. (475 aa)
HEAR3182Putative glutamine amidotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (353 aa)
HEAR3183Putative thioredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ArsC family. (123 aa)
insI1Transposase IS30 family; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin. (386 aa)
insI2Transposase IS30 family; Function of strongly homologous gene; extrachromosomal origin. (386 aa)
HEAR3217Hypothetical protein; No homology to any previously reported sequences. (86 aa)
HEAR3234Major facilitator superfamily transporter; Function of strongly homologous gene; transporter. (389 aa)
HEAR3240Hypothetical protein; No homology to any previously reported sequences. (39 aa)
HEAR3241Putative 4-oxalocrotonate tautomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 4-oxalocrotonate tautomerase family. (73 aa)
HEAR3242Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (400 aa)
HEAR3249Putative transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (439 aa)
HEAR3251Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (198 aa)
amaBN-carbamoyl-L-amino acid hydrolase (L-carbamoylase); Function of strongly homologous gene; enzyme. (432 aa)
HEAR3253Putative amidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (437 aa)
braG3High-affinity branched-chain amino acid transport ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. (235 aa)
HEAR3255Putative ABC transporter system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (276 aa)
HEAR3256Putative ABC-type branched-chain amino acid transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (388 aa)
HEAR3257Putative ABC-type branched-chain amino acid transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the binding-protein-dependent transport system permease family. (316 aa)
HEAR3258Putative ABC-type branched-chain amino acid transport systems, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (390 aa)
HEAR3278Putative transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (422 aa)
HEAR3324Putative regulator protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (247 aa)
HEAR3325Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (245 aa)
HEAR3334Putative regulator protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (248 aa)
HEAR3336Altronate dehydratase (N part); Function of strongly homologous gene; enzyme. (93 aa)
uxaAAltronate dehydratase; Function of strongly homologous gene; enzyme. (389 aa)
HEAR3340Putative phosphoglycerate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (317 aa)
HEAR3341Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the LDH2/MDH2 oxidoreductase family. (336 aa)
HEAR3346Putative universal stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (135 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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