STRINGSTRING
HEAR0023 HEAR0023 HEAR0036 HEAR0036 HEAR0058 HEAR0058 HEAR0175 HEAR0175 HEAR0236 HEAR0236 HEAR0237 HEAR0237 lptD lptD HEAR0463 HEAR0463 HEAR0464 HEAR0464 czcC1 czcC1 copA1 copA1 copB1 copB1 HEAR0714 HEAR0714 HEAR0789 HEAR0789 HEAR0959 HEAR0959 HEAR0961 HEAR0961 HEAR0977 HEAR0977 HEAR1040 HEAR1040 HEAR1062 HEAR1062 bamB bamB bamA bamA HEAR1368 HEAR1368 copB2 copB2 copA2 copA2 HEAR1582 HEAR1582 czcC2 czcC2 czcC3 czcC3 HEAR1831 HEAR1831 HEAR1854 HEAR1854 flgH flgH comL comL HEAR2010 HEAR2010 HEAR2174 HEAR2174 HEAR2514 HEAR2514 HEAR2555 HEAR2555 HEAR2582 HEAR2582 HEAR2583 HEAR2583 HEAR2618 HEAR2618 dnaK dnaK bamE bamE lptE lptE HEAR2710 HEAR2710 HEAR2780 HEAR2780 HEAR2874 HEAR2874 lolB lolB HEAR2963 HEAR2963 HEAR3087 HEAR3087 HEAR3090 HEAR3090 lptA lptA HEAR3121 HEAR3121 HEAR3245 HEAR3245 HEAR3248 HEAR3248 HEAR3306 HEAR3306 HEAR3395 HEAR3395 HEAR3400 HEAR3400 blc blc HEAR3447 HEAR3447
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEAR0023Putative bacterial secretion pathway protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial secretin family. (656 aa)
HEAR0036Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (716 aa)
HEAR0058Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (763 aa)
HEAR0175Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein. (431 aa)
HEAR0236Putative porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (357 aa)
HEAR0237Putative Porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (363 aa)
lptDPutative Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (750 aa)
HEAR0463Putative activation secretion protein (part 1); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (409 aa)
HEAR0464Putative activation secretion protein (part 2); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (133 aa)
czcC1Cobalt-zinc-cadmium resistance protein CzcC precursor (Cation efflux system protein CzcC); Function of homologous gene experimentally demonstrated in an other organism; transporter. (429 aa)
copA1Copper resistance protein A precursor; Function of homologous gene experimentally demonstrated in an other organism; cell process. (621 aa)
copB1Copper resistance protein B precursor; Function of homologous gene experimentally demonstrated in an other organism; transporter. (345 aa)
HEAR0714Putative polysaccharide export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (267 aa)
HEAR0789Putative Lytic transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (269 aa)
HEAR0959Putative TonB-like receptor precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (651 aa)
HEAR0961Vitamin B12 transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (622 aa)
HEAR0977Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (166 aa)
HEAR1040Putative lytic transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (312 aa)
HEAR1062Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (225 aa)
bamBPutative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (389 aa)
bamAPutative Bacterial surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (799 aa)
HEAR1368Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (725 aa)
copB2Copper resistance protein B precursor; Function of strongly homologous gene; transporter. (326 aa)
copA2Copper resistance protein A precursor; Function of homologous gene experimentally demonstrated in an other organism; factor. (626 aa)
HEAR1582Putative multicopper oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (464 aa)
czcC2Cobalt-zinc-cadmium resistance protein czcC precursor (Cation efflux system protein czcC); Function of homologous gene experimentally demonstrated in an other organism; transporter. (432 aa)
czcC3Cobalt-zinc-cadmium resistance protein CzcC precursor (Cation efflux system protein CzcC); Function of homologous gene experimentally demonstrated in an other organism; transporter. (435 aa)
HEAR1831Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (171 aa)
HEAR1854Putative hemolysin activation/secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (560 aa)
flgHFlagellar L-ring protein precursor (Basal body L-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (223 aa)
comLCompetence lipoprotein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (261 aa)
HEAR2010Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (224 aa)
HEAR2174Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (382 aa)
HEAR2514Conserved hypothetical protein, putative surface antigen; Homologs of previously reported genes of unknown function. (589 aa)
HEAR2555Putative porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (392 aa)
HEAR2582Putative outer membrane protein OmpA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (225 aa)
HEAR2583Putative outer membrane protein OmpA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (205 aa)
HEAR2618Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (582 aa)
dnaKChaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family. (649 aa)
bamEHypothetical protein, putative SmpA/OmlA domain; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (216 aa)
lptEPutative lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (174 aa)
HEAR2710Putative type I secretion outer membrane efflux TolC protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (434 aa)
HEAR2780Conserved hypothetical protein, putative transglycolsylase; Homologs of previously reported genes of unknown function. (225 aa)
HEAR2874Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (199 aa)
lolBPutative outer-membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (222 aa)
HEAR2963Putative outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (668 aa)
HEAR3087Conserved hypothetical protein, putative outer membrane protein; Homologs of previously reported genes of unknown function. (481 aa)
HEAR3090Putative porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (394 aa)
lptAConserved hypothetical protein, putative organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. (185 aa)
HEAR3121Putative type IV pilus biogenesis secretin PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (697 aa)
HEAR3245Putative copper-containing nitrite reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (309 aa)
HEAR3248Putative multicopper oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (367 aa)
HEAR3306Putative exogenous ferric siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (737 aa)
HEAR3395Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (170 aa)
HEAR3400TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor. (759 aa)
blcOuter membrane lipoprotein (lipocalin); Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (178 aa)
HEAR3447TonB dependent receptor; Function of strongly homologous gene; putative receptor. (672 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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