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fdsG fdsG HEAR0012 HEAR0012 norZ norZ dsbB dsbB glcD glcD HEAR0311 HEAR0311 aoxD aoxD aoxB aoxB aoxA aoxA azoR azoR etfB etfB etfA etfA rubA1 rubA1 nirM nirM HEAR0795 HEAR0795 HEAR0796 HEAR0796 HEAR0800 HEAR0800 fdxA1 fdxA1 HEAR0823 HEAR0823 HEAR0901 HEAR0901 HEAR1026 HEAR1026 HEAR1115 HEAR1115 coxN coxN HEAR1117 HEAR1117 coxP coxP HEAR1189 HEAR1189 bcp bcp HEAR1193 HEAR1193 HEAR1194 HEAR1194 HEAR1203 HEAR1203 HEAR1205 HEAR1205 HEAR1248 HEAR1248 azu azu HEAR1371 HEAR1371 cydA cydA cydB cydB HEAR1412 HEAR1412 HEAR1415 HEAR1415 HEAR1437 HEAR1437 HEAR1482 HEAR1482 HEAR1485 HEAR1485 cybB cybB HEAR1546 HEAR1546 HEAR1583 HEAR1583 HEAR1595 HEAR1595 HEAR1609 HEAR1609 fdxA2 fdxA2 ccoP ccoP fixO fixO fixN fixN HEAR1667 HEAR1667 HEAR1683 HEAR1683 sdhB sdhB sdhA sdhA sdhC sdhC etfD etfD nuoN nuoN nuoM nuoM nuoL nuoL nuoK nuoK nuoJ nuoJ nuoG nuoG nuoF nuoF nuoE nuoE nuoD nuoD nuoC nuoC nuoB nuoB nuoA nuoA HEAR2067 HEAR2067 fdx1 fdx1 HEAR2348 HEAR2348 HEAR2359 HEAR2359 HEAR2512 HEAR2512 HEAR2558 HEAR2558 cyoD cyoD cyoC cyoC cyoB cyoB cyoA cyoA HEAR2717 HEAR2717 rubA2 rubA2 HEAR2825 HEAR2825 HEAR2826 HEAR2826 HEAR2915 HEAR2915 ctaD ctaD ctaC ctaC HEAR3010 HEAR3010 petC petC petB petB petA petA msrQ msrQ HEAR3134 HEAR3134 dsbD dsbD HEAR3246 HEAR3246 HEAR3247 HEAR3247 HEAR3289 HEAR3289 HEAR3327 HEAR3327 HEAR3329 HEAR3329 HEAR3333 HEAR3333 HEAR3342 HEAR3342 HEAR3344 HEAR3344 HEAR3348 HEAR3348 fdsB fdsB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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fdsGNAD-dependent formate dehydrogenase gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (159 aa)
HEAR0012Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (90 aa)
norZNitric oxide reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (757 aa)
dsbBPutative Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. (158 aa)
glcDGlycolate oxidase subunit glcD; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (500 aa)
HEAR0311Putative cytochrome b561; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (174 aa)
aoxDCytochrome c-552 precursor (Cytochrome c552); Function of strongly homologous gene; carrier. (105 aa)
aoxBArsenite oxidase large subunit (AOI); Involved in the detoxification of arsenic. Oxidizes As(III)O3(3-) (arsenite) to the somewhat less toxic As(V)O4(3-) (arsenate); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (826 aa)
aoxAArsenite oxidase small subunit precursor, Rieske type subunit, twin arginine translocation peptide; Involved in the detoxification of arsenic. Oxidizes As(III)O3(3-) (arsenite) to the somewhat less toxic As(V)O4(3-) (arsenate); Belongs to the AOX family. (173 aa)
azoRFMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (204 aa)
etfBElectron transfer flavoprotein beta subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (249 aa)
etfAElectron transfer flavoprotein alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (309 aa)
rubA1Rubredoxin (Rd); Function of homologous gene experimentally demonstrated in an other organism; carrier. (54 aa)
nirMCytochrome c-551 precursor (Cytochrome c551) (Cytochrome C8); Function of homologous gene experimentally demonstrated in an other organism; carrier. (102 aa)
HEAR0795Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (123 aa)
HEAR0796Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (117 aa)
HEAR0800Putative electron transport complex, ferredoxin subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (239 aa)
fdxA1Ferredoxin-1 (Ferredoxin I) (FdI); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)
HEAR0823Cytochrome c2; Function of homologous gene experimentally demonstrated in an other organism; carrier. (122 aa)
HEAR0901Hypothetical protein; No homology to any previously reported sequences. (137 aa)
HEAR1026Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (188 aa)
HEAR1115Putative Cytochrome c oxidase, subunit II (Cytochrome bb3 subunit 2) CoxM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (400 aa)
coxNCytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (586 aa)
HEAR1117Putative cytochrome c oxidase subunit III CoxO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (216 aa)
coxPCytochrome-c oxidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (230 aa)
HEAR1189Putative sulfite dehydrogenase cytochrome subunit SoxD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (359 aa)
bcpPseudoazurin precursor (Blue copper protein); Function of homologous gene experimentally demonstrated in an other organism; transporter. (144 aa)
HEAR1193Putative Cytochrome c SoxA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (265 aa)
HEAR1194Putative cytochrome c (SoxX); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (204 aa)
HEAR1203Putative D-lactate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (469 aa)
HEAR1205Flavodoxin/nitric oxide synthase; Function of strongly homologous gene; enzyme; Belongs to the WrbA family. (192 aa)
HEAR1248Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (155 aa)
azuAzurin precursor; Transfers electrons from cytochrome c551 to cytochrome oxidase. (150 aa)
HEAR1371Putative cytochrome c precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (165 aa)
cydACytochrome bd ubiquinol oxidase subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier. (533 aa)
cydBCytochrome bd ubiquinol oxidase subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (384 aa)
HEAR1412Putative formate dehydrogenase subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (988 aa)
HEAR1415Putative formate dehydrogenase subunit C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (380 aa)
HEAR1437Putative Metallo-beta-lactamase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (262 aa)
HEAR1482Function of homologous gene experimentally demonstrated in an other organism; carrier. (136 aa)
HEAR1485Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (166 aa)
cybBCytochrome b561; Function of strongly homologous gene; membrane component. (181 aa)
HEAR1546Putative cytochrome c, class I:Iron permease FTR1 precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (641 aa)
HEAR1583Putative copper-binding protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (173 aa)
HEAR1595Putative cytochrome c, class I:Iron permease FTR1 precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (648 aa)
HEAR1609Hypothetical protein; No homology to any previously reported sequences. (167 aa)
fdxA2Ferredoxin 1; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)
ccoPCytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (312 aa)
fixOCytochrome c oxidase cbb3-type, monoheme subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (204 aa)
fixNCytochrome c oxidase cbb3-type, subunit 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (483 aa)
HEAR1667Putative Nitric oxide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (758 aa)
HEAR1683Putative permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (434 aa)
sdhBSuccinate dehydrogenase (ubiquinone), Fe-S protein; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (236 aa)
sdhASuccinate dehydrogenase, flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (592 aa)
sdhCSuccinate dehydrogenase cytochrome b556 subunit (Cytochrome b-556); Function of strongly homologous gene; membrane component. (136 aa)
etfDElectron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (562 aa)
nuoNNADH-ubiquinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (494 aa)
nuoMNADH-quinone oxidoreductase subunit M; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (496 aa)
nuoLNADH-quinone oxidoreductase subunit L (NADH dehydrogenase I subunit L) (NDH-1 subunit L); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (687 aa)
nuoKNADH-quinone oxidoreductase subunit K (NADH dehydrogenase I subunit K) (NDH-1 subunit K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
nuoJNADH-quinone oxidoreductase subunit J (NADH dehydrogenase I subunit J) (NDH-1 subunit J); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (213 aa)
nuoGNADH-quinone oxidoreductase subunit G (NADH dehydrogenase I subunit G) (NDH-1 subunit G); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (777 aa)
nuoFNADH-quinone oxidoreductase subunit F (NADH dehydrogenase I subunit F) (NDH-1 subunit F); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (431 aa)
nuoENADH-quinone oxidoreductase subunit E (NADH dehydrogenase I subunit E) (NDH-1 subunit E); Function of strongly homologous gene; enzyme. (159 aa)
nuoDNADH-ubiquinone oxidoreductase D subunit (NADH dehydrogenase subunit D); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa)
nuoCNADH-quinone oxidoreductase chain C (NADH dehydrogenase I, chain C) (NDH-1, chain C); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (198 aa)
nuoBNADH-quinone oxidoreductase subunit B (NADH dehydrogenase I subunit B) (NDH-1 subunit B); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity). (158 aa)
nuoANADH-quinone oxidoreductase chain A (NADH dehydrogenase I, chain A) (NDH-1, chain A); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (119 aa)
HEAR2067Conserved hypothetical protein, putative glutaredoxin; Homologs of previously reported genes of unknown function. (93 aa)
fdx12Fe-2S ferredoxin; Function of homologous gene experimentally demonstrated in an other organism; carrier. (112 aa)
HEAR2348Putative Sulfite:cytochrome c oxidoreductase subunit B SorB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (104 aa)
HEAR2359Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (183 aa)
HEAR2512Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (277 aa)
HEAR2558Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (464 aa)
cyoDCytochrome o ubiquinol oxidase protein CyoD (Ubiquinol oxidase chain D); Function of homologous gene experimentally demonstrated in an other organism; carrier. (136 aa)
cyoCCytochrome o ubiquinol oxidase subunit 3 (Cytochrome o ubiquinol oxidase subunit III); Function of homologous gene experimentally demonstrated in an other organism; carrier. (214 aa)
cyoBCytochrome o ubiquinol oxidase subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the heme-copper respiratory oxidase family. (667 aa)
cyoAUbiquinol oxidase subunit 2; Function of homologous gene experimentally demonstrated in an other organism; carrier. (355 aa)
HEAR2717Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (102 aa)
rubA2Rubredoxin (Rd); Function of homologous gene experimentally demonstrated in an other organism; carrier. (64 aa)
HEAR2825Putative cytochrome c4; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (238 aa)
HEAR2826Cytochrome c, class I precursor; Function of strongly homologous gene; carrier. (429 aa)
HEAR2915Cytochrome c oxidase polypeptide III; Function of strongly homologous gene; carrier. (288 aa)
ctaDCytochrome c oxidase subunit 1 (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (533 aa)
ctaCCytochrome c oxidase, subunit II (Cytochrome aa3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (386 aa)
HEAR3010Multicomponent K+:H+ antiporter subunit D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (542 aa)
petCCytochrome c1 precursor; Function of strongly homologous gene; carrier. (254 aa)
petBCytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (467 aa)
petAUbiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (202 aa)
msrQConserved hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, [...] (218 aa)
HEAR3134Cytochrome c4; Function of strongly homologous gene; carrier. (221 aa)
dsbDThiol:disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (586 aa)
HEAR3246Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (125 aa)
HEAR3247Putative cytochrome c, class I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (231 aa)
HEAR3289Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (411 aa)
HEAR3327Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; Function of strongly homologous gene; enzyme. (238 aa)
HEAR3329Putative fumarate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (118 aa)
HEAR3333Putative succinate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (580 aa)
HEAR3342Putative molybdopterin oxidoreductase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (962 aa)
HEAR3344Putative DMSO reductase anchor subunit (DmsC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (314 aa)
HEAR3348Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (181 aa)
fdsBNAD-dependent formate dehydrogenase beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (525 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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