STRINGSTRING
HEAR3400 HEAR3400 HEAR1368 HEAR1368 HEAR0319 HEAR0319 HEAR0036 HEAR0036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEAR3400TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor. (759 aa)
HEAR1368Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (725 aa)
HEAR0319Putative Periplasmic protein TonB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (228 aa)
HEAR0036Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (716 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.