STRINGSTRING
HEAR0977 HEAR0977 HEAR2890 HEAR2890 lolB lolB bamE bamE dnaK dnaK HEAR2618 HEAR2618 mltB mltB HEAR2514 HEAR2514 HEAR2457 HEAR2457 pal pal HEAR2322 HEAR2322 HEAR2232 HEAR2232 HEAR2211 HEAR2211 HEAR2174 HEAR2174 HEAR2010 HEAR2010 HEAR1939 HEAR1939 comL comL HEAR1854 HEAR1854 HEAR1831 HEAR1831 HEAR1748 HEAR1748 HEAR1739 HEAR1739 HEAR1658 HEAR1658 copB2 copB2 HEAR1368 HEAR1368 bamA bamA bamB bamB HEAR1040 HEAR1040 HEAR3447 HEAR3447 HEAR0973 HEAR0973 HEAR0959 HEAR0959 HEAR0789 HEAR0789 copB1 copB1 lptD lptD HEAR0206 HEAR0206 HEAR0175 HEAR0175 rlpA rlpA HEAR0058 HEAR0058 HEAR0036 HEAR0036 HEAR0023 HEAR0023 HEAR3087 HEAR3087 HEAR3121 HEAR3121 HEAR3306 HEAR3306 HEAR3395 HEAR3395 HEAR3400 HEAR3400 blc blc lptE lptE HEAR2780 HEAR2780 prdX1 prdX1 HEAR2874 HEAR2874
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEAR0977Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (166 aa)
HEAR2890Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (602 aa)
lolBPutative outer-membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (222 aa)
bamEHypothetical protein, putative SmpA/OmlA domain; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (216 aa)
dnaKChaperone protein DnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family. (649 aa)
HEAR2618Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (582 aa)
mltBMembrane-bound lytic murein transglycosylase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (367 aa)
HEAR2514Conserved hypothetical protein, putative surface antigen; Homologs of previously reported genes of unknown function. (589 aa)
HEAR2457Putative outer membrane lipoprotein precursor SlyB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (160 aa)
palPutative peptidoglycan-associated lipoprotein precursor pal-like; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (167 aa)
HEAR2322Putative lytic transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (514 aa)
HEAR2232Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (226 aa)
HEAR2211Conserved hypothetical protein, putative regulator of chromosome condensation; Homologs of previously reported genes of unknown function. (500 aa)
HEAR2174Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (382 aa)
HEAR2010Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (224 aa)
HEAR1939Putative general secretion pathway protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (581 aa)
comLCompetence lipoprotein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (261 aa)
HEAR1854Putative hemolysin activation/secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (560 aa)
HEAR1831Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (171 aa)
HEAR1748Putative peptidyl-prolyl cis-trans isomerase D, ppiD-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (636 aa)
HEAR1739Putative PpiC-type peptidyl-prolyl cis-trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (258 aa)
HEAR1658Putative PpiC-type peptidyl-prolyl cis-trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (248 aa)
copB2Copper resistance protein B precursor; Function of strongly homologous gene; transporter. (326 aa)
HEAR1368Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (725 aa)
bamAPutative Bacterial surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (799 aa)
bamBPutative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (389 aa)
HEAR1040Putative lytic transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (312 aa)
HEAR3447TonB dependent receptor; Function of strongly homologous gene; putative receptor. (672 aa)
HEAR0973Conserved hypothetical protein, putative porin; Homologs of previously reported genes of unknown function. (244 aa)
HEAR0959Putative TonB-like receptor precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (651 aa)
HEAR0789Putative Lytic transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (269 aa)
copB1Copper resistance protein B precursor; Function of homologous gene experimentally demonstrated in an other organism; transporter. (345 aa)
lptDPutative Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (750 aa)
HEAR0206Putative Membrane-bound lytic murein transglycosylase MltA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (402 aa)
HEAR0175Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein. (431 aa)
rlpAPutative Lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (336 aa)
HEAR0058Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (763 aa)
HEAR0036Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (716 aa)
HEAR0023Putative bacterial secretion pathway protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the bacterial secretin family. (656 aa)
HEAR3087Conserved hypothetical protein, putative outer membrane protein; Homologs of previously reported genes of unknown function. (481 aa)
HEAR3121Putative type IV pilus biogenesis secretin PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (697 aa)
HEAR3306Putative exogenous ferric siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (737 aa)
HEAR3395Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (170 aa)
HEAR3400TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor. (759 aa)
blcOuter membrane lipoprotein (lipocalin); Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (178 aa)
lptEPutative lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (174 aa)
HEAR2780Conserved hypothetical protein, putative transglycolsylase; Homologs of previously reported genes of unknown function. (225 aa)
prdX1Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (167 aa)
HEAR2874Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (199 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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