STRINGSTRING
HEAR0959 HEAR0959 HEAR3447 HEAR3447 blc blc HEAR3400 HEAR3400 HEAR3306 HEAR3306 HEAR2963 HEAR2963 lolB lolB lptE lptE bamE bamE comL comL flgH flgH HEAR1368 HEAR1368 bamA bamA bamB bamB HEAR0961 HEAR0961 lptD lptD HEAR0058 HEAR0058 HEAR0036 HEAR0036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HEAR0959Putative TonB-like receptor precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (651 aa)
HEAR3447TonB dependent receptor; Function of strongly homologous gene; putative receptor. (672 aa)
blcOuter membrane lipoprotein (lipocalin); Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (178 aa)
HEAR3400TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor. (759 aa)
HEAR3306Putative exogenous ferric siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (737 aa)
HEAR2963Putative outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (668 aa)
lolBPutative outer-membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (222 aa)
lptEPutative lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (174 aa)
bamEHypothetical protein, putative SmpA/OmlA domain; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (216 aa)
comLCompetence lipoprotein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (261 aa)
flgHFlagellar L-ring protein precursor (Basal body L-ring protein); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (223 aa)
HEAR1368Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (725 aa)
bamAPutative Bacterial surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (799 aa)
bamBPutative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (389 aa)
HEAR0961Vitamin B12 transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (622 aa)
lptDPutative Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (750 aa)
HEAR0058Putative TonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (763 aa)
HEAR0036Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (716 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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