10 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113128231	Low density lipoprotein receptor b. (875 aa)
	LOC113127007	Low density lipoprotein receptor adaptor protein 1a. (304 aa)
	scarb1	Scavenger receptor class B, member 1; Belongs to the CD36 family. (498 aa)
	ENSMAMP00000009149	Vitellogenin domain-containing protein. (425 aa)
	LOC113136867	Apolipoprotein Bb, tandem duplicate 2. (3596 aa)
	LOC113136388	Apolipoprotein Eb. (276 aa)
	ENSMAMP00000010696	Low density lipoprotein receptor-related protein 1Ab. (4475 aa)
	ENSMAMP00000013611	Low density lipoprotein receptor a. (834 aa)
	ldlrap1	Low density lipoprotein receptor adaptor protein 1b. (313 aa)
	ENSMAMP00000025379	Si:dkey-71h2.2. (252 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000009149	ENSMAMP00000010696	ENSMAMP00000009149	ENSMAMP00000010696	Vitellogenin domain-containing protein.	Low density lipoprotein receptor-related protein 1Ab.	0.535
ENSMAMP00000009149	ENSMAMP00000013611	ENSMAMP00000009149	ENSMAMP00000013611	Vitellogenin domain-containing protein.	Low density lipoprotein receptor a.	0.605
ENSMAMP00000009149	ENSMAMP00000025379	ENSMAMP00000009149	ENSMAMP00000025379	Vitellogenin domain-containing protein.	Si:dkey-71h2.2.	0.430
ENSMAMP00000009149	LOC113127007	ENSMAMP00000009149	ENSMAMP00000006688	Vitellogenin domain-containing protein.	Low density lipoprotein receptor adaptor protein 1a.	0.599
ENSMAMP00000009149	LOC113128231	ENSMAMP00000009149	ENSMAMP00000004109	Vitellogenin domain-containing protein.	Low density lipoprotein receptor b.	0.605
ENSMAMP00000009149	LOC113136388	ENSMAMP00000009149	ENSMAMP00000009846	Vitellogenin domain-containing protein.	Apolipoprotein Eb.	0.856
ENSMAMP00000009149	ldlrap1	ENSMAMP00000009149	ENSMAMP00000015531	Vitellogenin domain-containing protein.	Low density lipoprotein receptor adaptor protein 1b.	0.711
ENSMAMP00000009149	scarb1	ENSMAMP00000009149	ENSMAMP00000009077	Vitellogenin domain-containing protein.	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.783
ENSMAMP00000010696	ENSMAMP00000009149	ENSMAMP00000010696	ENSMAMP00000009149	Low density lipoprotein receptor-related protein 1Ab.	Vitellogenin domain-containing protein.	0.535
ENSMAMP00000010696	ENSMAMP00000025379	ENSMAMP00000010696	ENSMAMP00000025379	Low density lipoprotein receptor-related protein 1Ab.	Si:dkey-71h2.2.	0.658
ENSMAMP00000010696	LOC113127007	ENSMAMP00000010696	ENSMAMP00000006688	Low density lipoprotein receptor-related protein 1Ab.	Low density lipoprotein receptor adaptor protein 1a.	0.672
ENSMAMP00000010696	LOC113136388	ENSMAMP00000010696	ENSMAMP00000009846	Low density lipoprotein receptor-related protein 1Ab.	Apolipoprotein Eb.	0.912
ENSMAMP00000010696	LOC113136867	ENSMAMP00000010696	ENSMAMP00000009162	Low density lipoprotein receptor-related protein 1Ab.	Apolipoprotein Bb, tandem duplicate 2.	0.535
ENSMAMP00000010696	ldlrap1	ENSMAMP00000010696	ENSMAMP00000015531	Low density lipoprotein receptor-related protein 1Ab.	Low density lipoprotein receptor adaptor protein 1b.	0.759
ENSMAMP00000010696	scarb1	ENSMAMP00000010696	ENSMAMP00000009077	Low density lipoprotein receptor-related protein 1Ab.	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.445
ENSMAMP00000013611	ENSMAMP00000009149	ENSMAMP00000013611	ENSMAMP00000009149	Low density lipoprotein receptor a.	Vitellogenin domain-containing protein.	0.605
ENSMAMP00000013611	ENSMAMP00000025379	ENSMAMP00000013611	ENSMAMP00000025379	Low density lipoprotein receptor a.	Si:dkey-71h2.2.	0.874
ENSMAMP00000013611	LOC113127007	ENSMAMP00000013611	ENSMAMP00000006688	Low density lipoprotein receptor a.	Low density lipoprotein receptor adaptor protein 1a.	0.891
ENSMAMP00000013611	LOC113136388	ENSMAMP00000013611	ENSMAMP00000009846	Low density lipoprotein receptor a.	Apolipoprotein Eb.	0.711
ENSMAMP00000013611	LOC113136867	ENSMAMP00000013611	ENSMAMP00000009162	Low density lipoprotein receptor a.	Apolipoprotein Bb, tandem duplicate 2.	0.605