STRINGSTRING
LOC113128310 LOC113128310 riok3 riok3 bud23 bud23 dimt1 dimt1 riok2 riok2 LOC113132379 LOC113132379 tsr1 tsr1 mettl27 mettl27 gcc1 gcc1 pno1 pno1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC113128310LTV1 ribosome biogenesis factor. (476 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (514 aa)
bud23BUD23 rRNA methyltransferase and ribosome maturation factor. (346 aa)
dimt1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (306 aa)
riok2RIO kinase 2 (yeast). (511 aa)
LOC113132379LTV1 ribosome biogenesis factor. (476 aa)
tsr1TSR1 ribosome maturation factor. (842 aa)
mettl27Methyltransferase like 27. (225 aa)
gcc1GRIP and coiled-coil domain containing 1. (766 aa)
pno1Partner of NOB1 homolog. (248 aa)
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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