(15 nodes) Prp19 complex, and U2-type catalytic step 2 spliceosome network (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aqr	Aquarius intron-binding spliceosomal factor. (1470 aa)
	bud31	BUD31 homolog. (144 aa)
	prpf19	Pre-mRNA processing factor 19. (505 aa)
	rbm22	RNA binding motif protein 22. (427 aa)
	ctnnbl1	Catenin, beta like 1. (579 aa)
	snw1	SNW domain containing 1. (537 aa)
	crnkl1	Crooked neck pre-mRNA splicing factor 1. (758 aa)
	LOC113130904	ISY1 splicing factor homolog. (283 aa)
	plrg1	Pleiotropic regulator 1. (511 aa)
	ppie	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
	xab2	XPA binding protein 2. (848 aa)
	cwc15	CWC15 spliceosome associated protein homolog. (237 aa)
	bcas2	BCAS2 pre-mRNA processing factor. (225 aa)
	ZNF830	Zinc finger protein 830. (349 aa)
	cdc5l	CDC5 cell division cycle 5-like (S. pombe). (812 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC113130904	ZNF830	ENSMAMP00000014015	ENSMAMP00000022186	ISY1 splicing factor homolog.	Zinc finger protein 830.	0.992
LOC113130904	aqr	ENSMAMP00000014015	ENSMAMP00000008455	ISY1 splicing factor homolog.	Aquarius intron-binding spliceosomal factor.	0.998
LOC113130904	bcas2	ENSMAMP00000014015	ENSMAMP00000020587	ISY1 splicing factor homolog.	BCAS2 pre-mRNA processing factor.	0.930
LOC113130904	bud31	ENSMAMP00000014015	ENSMAMP00000009410	ISY1 splicing factor homolog.	BUD31 homolog.	0.999
LOC113130904	cdc5l	ENSMAMP00000014015	ENSMAMP00000033302	ISY1 splicing factor homolog.	CDC5 cell division cycle 5-like (S. pombe).	0.994
LOC113130904	crnkl1	ENSMAMP00000014015	ENSMAMP00000012906	ISY1 splicing factor homolog.	Crooked neck pre-mRNA splicing factor 1.	0.999
LOC113130904	ctnnbl1	ENSMAMP00000014015	ENSMAMP00000012033	ISY1 splicing factor homolog.	Catenin, beta like 1.	0.501
LOC113130904	cwc15	ENSMAMP00000014015	ENSMAMP00000020109	ISY1 splicing factor homolog.	CWC15 spliceosome associated protein homolog.	0.965
LOC113130904	plrg1	ENSMAMP00000014015	ENSMAMP00000014075	ISY1 splicing factor homolog.	Pleiotropic regulator 1.	0.989
LOC113130904	ppie	ENSMAMP00000014015	ENSMAMP00000014742	ISY1 splicing factor homolog.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.998
LOC113130904	prpf19	ENSMAMP00000014015	ENSMAMP00000010198	ISY1 splicing factor homolog.	Pre-mRNA processing factor 19.	0.999
LOC113130904	rbm22	ENSMAMP00000014015	ENSMAMP00000010901	ISY1 splicing factor homolog.	RNA binding motif protein 22.	0.999
LOC113130904	snw1	ENSMAMP00000014015	ENSMAMP00000012363	ISY1 splicing factor homolog.	SNW domain containing 1.	0.999
LOC113130904	xab2	ENSMAMP00000014015	ENSMAMP00000019411	ISY1 splicing factor homolog.	XPA binding protein 2.	0.999
ZNF830	LOC113130904	ENSMAMP00000022186	ENSMAMP00000014015	Zinc finger protein 830.	ISY1 splicing factor homolog.	0.992
ZNF830	aqr	ENSMAMP00000022186	ENSMAMP00000008455	Zinc finger protein 830.	Aquarius intron-binding spliceosomal factor.	0.997
ZNF830	bud31	ENSMAMP00000022186	ENSMAMP00000009410	Zinc finger protein 830.	BUD31 homolog.	0.982
ZNF830	crnkl1	ENSMAMP00000022186	ENSMAMP00000012906	Zinc finger protein 830.	Crooked neck pre-mRNA splicing factor 1.	0.992
ZNF830	ctnnbl1	ENSMAMP00000022186	ENSMAMP00000012033	Zinc finger protein 830.	Catenin, beta like 1.	0.436
ZNF830	ppie	ENSMAMP00000022186	ENSMAMP00000014742	Zinc finger protein 830.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.997