42 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (225 aa)
	rab3c	RAB3C, member RAS oncogene family. (225 aa)
	ENSMAMP00000002373	Syntaxin 3A; Belongs to the syntaxin family. (306 aa)
	ENSMAMP00000003383	Zgc:92912. (119 aa)
	LOC113128521	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (336 aa)
	LOC113127984	Uncharacterized protein. (278 aa)
	LOC113124335	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	RIMS2	Regulating synaptic membrane exocytosis 2. (1292 aa)
	LOC113130585	Uncharacterized protein. (430 aa)
	UNC13B	Unc-13 homolog B. (1574 aa)
	LOC113139154	Syntaxin 2b; Belongs to the syntaxin family. (293 aa)
	ENSMAMP00000007695	RIMS binding protein 2. (987 aa)
	ENSMAMP00000008077	C2 domain-containing protein. (567 aa)
	rab3a	RAB3A, member RAS oncogene family, b. (219 aa)
	LOC113134029	RAB3A, member RAS oncogene family. (219 aa)
	LOC113124856	t-SNARE coiled-coil homology domain-containing protein. (265 aa)
	ENSMAMP00000010316	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (212 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
	ENSMAMP00000010649	Uncharacterized protein. (999 aa)
	stx4	Syntaxin 4; Belongs to the syntaxin family. (297 aa)
	ENSMAMP00000011233	Regulating synaptic membrane exocytosis 3. (326 aa)
	ENSMAMP00000012831	V-SNARE coiled-coil homology domain-containing protein. (85 aa)
	ENSMAMP00000013489	Vesicle-associated membrane protein 2. (133 aa)
	ENSMAMP00000014085	Uncharacterized protein. (1467 aa)
	ENSMAMP00000014112	Syntaxin 1B; Belongs to the syntaxin family. (288 aa)
	ENSMAMP00000015024	C2 domain-containing protein. (322 aa)
	ENSMAMP00000015094	Regulating synaptic membrane exocytosis 1a. (917 aa)
	LOC113135984	Synaptotagmin Vb. (425 aa)
	ENSMAMP00000018061	Syntaxin 1A (brain); Belongs to the syntaxin family. (280 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	ENSMAMP00000019644	Complexin 2. (142 aa)
	ENSMAMP00000022853	Synaptotagmin Ia. (418 aa)
	ENSMAMP00000024000	Uncharacterized protein. (1533 aa)
	syt11	Synaptotagmin XIb. (472 aa)
	ENSMAMP00000026918	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	APBA1	Amyloid beta precursor protein binding family A member 1. (986 aa)
	ENSMAMP00000028379	Vesicle-associated membrane protein 1. (109 aa)
	UNC13A	Unc-13 homolog A. (1549 aa)
	ENSMAMP00000029596	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (289 aa)
	stxbp2	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	ENSMAMP00000033045	Uncharacterized protein. (1507 aa)
	LOC113145471	Synaptotagmin IIa. (432 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	ENSMAMP00000002373	ENSMAMP00000027470	ENSMAMP00000002373	Amyloid beta precursor protein binding family A member 1.	Syntaxin 3A; Belongs to the syntaxin family.	0.758
APBA1	ENSMAMP00000003383	ENSMAMP00000027470	ENSMAMP00000003383	Amyloid beta precursor protein binding family A member 1.	Zgc:92912.	0.501
APBA1	ENSMAMP00000010316	ENSMAMP00000027470	ENSMAMP00000010316	Amyloid beta precursor protein binding family A member 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.598
APBA1	ENSMAMP00000011233	ENSMAMP00000027470	ENSMAMP00000011233	Amyloid beta precursor protein binding family A member 1.	Regulating synaptic membrane exocytosis 3.	0.528
APBA1	ENSMAMP00000012831	ENSMAMP00000027470	ENSMAMP00000012831	Amyloid beta precursor protein binding family A member 1.	V-SNARE coiled-coil homology domain-containing protein.	0.476
APBA1	ENSMAMP00000013489	ENSMAMP00000027470	ENSMAMP00000013489	Amyloid beta precursor protein binding family A member 1.	Vesicle-associated membrane protein 2.	0.501
APBA1	ENSMAMP00000014085	ENSMAMP00000027470	ENSMAMP00000014085	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein.	0.459
APBA1	ENSMAMP00000014112	ENSMAMP00000027470	ENSMAMP00000014112	Amyloid beta precursor protein binding family A member 1.	Syntaxin 1B; Belongs to the syntaxin family.	0.758
APBA1	ENSMAMP00000015024	ENSMAMP00000027470	ENSMAMP00000015024	Amyloid beta precursor protein binding family A member 1.	C2 domain-containing protein.	0.477
APBA1	ENSMAMP00000015094	ENSMAMP00000027470	ENSMAMP00000015094	Amyloid beta precursor protein binding family A member 1.	Regulating synaptic membrane exocytosis 1a.	0.477
APBA1	ENSMAMP00000018061	ENSMAMP00000027470	ENSMAMP00000018061	Amyloid beta precursor protein binding family A member 1.	Syntaxin 1A (brain); Belongs to the syntaxin family.	0.758
APBA1	ENSMAMP00000019644	ENSMAMP00000027470	ENSMAMP00000019644	Amyloid beta precursor protein binding family A member 1.	Complexin 2.	0.428
APBA1	ENSMAMP00000022853	ENSMAMP00000027470	ENSMAMP00000022853	Amyloid beta precursor protein binding family A member 1.	Synaptotagmin Ia.	0.444
APBA1	ENSMAMP00000024000	ENSMAMP00000027470	ENSMAMP00000024000	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein.	0.444
APBA1	ENSMAMP00000026918	ENSMAMP00000027470	ENSMAMP00000026918	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.855
APBA1	ENSMAMP00000028379	ENSMAMP00000027470	ENSMAMP00000028379	Amyloid beta precursor protein binding family A member 1.	Vesicle-associated membrane protein 1.	0.402
APBA1	ENSMAMP00000029596	ENSMAMP00000027470	ENSMAMP00000029596	Amyloid beta precursor protein binding family A member 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.542
APBA1	ENSMAMP00000033045	ENSMAMP00000027470	ENSMAMP00000033045	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein.	0.713
APBA1	LOC113124335	ENSMAMP00000027470	ENSMAMP00000003964	Amyloid beta precursor protein binding family A member 1.	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	0.859
APBA1	LOC113124856	ENSMAMP00000027470	ENSMAMP00000009596	Amyloid beta precursor protein binding family A member 1.	t-SNARE coiled-coil homology domain-containing protein.	0.585