(15 nodes) Mixed, incl. Glycine cleavage T-protein C-terminal barrel domain, and Glycine cleavage complex network (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ddo	Zgc:172341. (338 aa)
	pipox	Pipecolic acid oxidase. (388 aa)
	dmgdh	Dimethylglycine dehydrogenase. (870 aa)
	shmt1	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (482 aa)
	pdpr	Pyruvate dehydrogenase phosphatase regulatory subunit. (890 aa)
	ENSMAMP00000010077	Glycine dehydrogenase (decarboxylating). (988 aa)
	sardh	Sarcosine dehydrogenase. (916 aa)
	LOC113132386	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (162 aa)
	alas1	5-aminolevulinate synthase. (627 aa)
	dao	D-amino-acid oxidase, tandem duplicate 2. (345 aa)
	iba57	Iron-sulfur cluster assembly factor IBA57. (367 aa)
	ENSMAMP00000024603	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (403 aa)
	LOC113145167	5-aminolevulinate synthase. (591 aa)
	LOC113138284	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (174 aa)
	LOC113145132	5-aminolevulinate synthase. (647 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000010077	ENSMAMP00000024603	ENSMAMP00000010077	ENSMAMP00000024603	Glycine dehydrogenase (decarboxylating).	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.999
ENSMAMP00000010077	LOC113132386	ENSMAMP00000010077	ENSMAMP00000013260	Glycine dehydrogenase (decarboxylating).	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.993
ENSMAMP00000010077	LOC113138284	ENSMAMP00000010077	ENSMAMP00000032037	Glycine dehydrogenase (decarboxylating).	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.993
ENSMAMP00000010077	LOC113145132	ENSMAMP00000010077	ENSMAMP00000035915	Glycine dehydrogenase (decarboxylating).	5-aminolevulinate synthase.	0.881
ENSMAMP00000010077	LOC113145167	ENSMAMP00000010077	ENSMAMP00000028090	Glycine dehydrogenase (decarboxylating).	5-aminolevulinate synthase.	0.881
ENSMAMP00000010077	alas1	ENSMAMP00000010077	ENSMAMP00000021077	Glycine dehydrogenase (decarboxylating).	5-aminolevulinate synthase.	0.881
ENSMAMP00000010077	dao	ENSMAMP00000010077	ENSMAMP00000023819	Glycine dehydrogenase (decarboxylating).	D-amino-acid oxidase, tandem duplicate 2.	0.876
ENSMAMP00000010077	ddo	ENSMAMP00000010077	ENSMAMP00000000342	Glycine dehydrogenase (decarboxylating).	Zgc:172341.	0.876
ENSMAMP00000010077	dmgdh	ENSMAMP00000010077	ENSMAMP00000005765	Glycine dehydrogenase (decarboxylating).	Dimethylglycine dehydrogenase.	0.980
ENSMAMP00000010077	iba57	ENSMAMP00000010077	ENSMAMP00000024217	Glycine dehydrogenase (decarboxylating).	Iron-sulfur cluster assembly factor IBA57.	0.818
ENSMAMP00000010077	pdpr	ENSMAMP00000010077	ENSMAMP00000009728	Glycine dehydrogenase (decarboxylating).	Pyruvate dehydrogenase phosphatase regulatory subunit.	0.984
ENSMAMP00000010077	pipox	ENSMAMP00000010077	ENSMAMP00000005460	Glycine dehydrogenase (decarboxylating).	Pipecolic acid oxidase.	0.895
ENSMAMP00000010077	sardh	ENSMAMP00000010077	ENSMAMP00000012754	Glycine dehydrogenase (decarboxylating).	Sarcosine dehydrogenase.	0.985
ENSMAMP00000010077	shmt1	ENSMAMP00000010077	ENSMAMP00000009327	Glycine dehydrogenase (decarboxylating).	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.978
ENSMAMP00000024603	ENSMAMP00000010077	ENSMAMP00000024603	ENSMAMP00000010077	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	Glycine dehydrogenase (decarboxylating).	0.999
ENSMAMP00000024603	LOC113132386	ENSMAMP00000024603	ENSMAMP00000013260	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.997
ENSMAMP00000024603	LOC113138284	ENSMAMP00000024603	ENSMAMP00000032037	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.997
ENSMAMP00000024603	LOC113145132	ENSMAMP00000024603	ENSMAMP00000035915	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	5-aminolevulinate synthase.	0.664
ENSMAMP00000024603	LOC113145167	ENSMAMP00000024603	ENSMAMP00000028090	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	5-aminolevulinate synthase.	0.664
ENSMAMP00000024603	alas1	ENSMAMP00000024603	ENSMAMP00000021077	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	5-aminolevulinate synthase.	0.664