11 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	apof	Apolipoprotein F. (438 aa)
	ENSMAMP00000004424	Uncharacterized protein. (1226 aa)
	LOC113126988	Apolipoprotein Ea. (261 aa)
	ENSMAMP00000009120	Uncharacterized protein. (401 aa)
	ENSMAMP00000009804	Uncharacterized protein. (286 aa)
	LOC113136390	Uncharacterized protein. (246 aa)
	LOC113136485	Uncharacterized protein. (83 aa)
	pltp	Phospholipid transfer protein. (490 aa)
	cetp	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (497 aa)
	pla2g15	Phospholipase A2, group XV. (421 aa)
	lcat	Lecithin-cholesterol acyltransferase. (434 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000004424	ENSMAMP00000009804	ENSMAMP00000004424	ENSMAMP00000009804	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSMAMP00000004424	LOC113126988	ENSMAMP00000004424	ENSMAMP00000008114	Uncharacterized protein.	Apolipoprotein Ea.	0.755
ENSMAMP00000004424	LOC113136390	ENSMAMP00000004424	ENSMAMP00000009828	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSMAMP00000004424	LOC113136485	ENSMAMP00000004424	ENSMAMP00000009861	Uncharacterized protein.	Uncharacterized protein.	0.546
ENSMAMP00000004424	apof	ENSMAMP00000004424	ENSMAMP00000002959	Uncharacterized protein.	Apolipoprotein F.	0.739
ENSMAMP00000004424	cetp	ENSMAMP00000004424	ENSMAMP00000020744	Uncharacterized protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.743
ENSMAMP00000004424	pltp	ENSMAMP00000004424	ENSMAMP00000013501	Uncharacterized protein.	Phospholipid transfer protein.	0.476
ENSMAMP00000009120	ENSMAMP00000009804	ENSMAMP00000009120	ENSMAMP00000009804	Uncharacterized protein.	Uncharacterized protein.	0.917
ENSMAMP00000009120	LOC113126988	ENSMAMP00000009120	ENSMAMP00000008114	Uncharacterized protein.	Apolipoprotein Ea.	0.775
ENSMAMP00000009120	LOC113136390	ENSMAMP00000009120	ENSMAMP00000009828	Uncharacterized protein.	Uncharacterized protein.	0.917
ENSMAMP00000009120	LOC113136485	ENSMAMP00000009120	ENSMAMP00000009861	Uncharacterized protein.	Uncharacterized protein.	0.546
ENSMAMP00000009120	apof	ENSMAMP00000009120	ENSMAMP00000002959	Uncharacterized protein.	Apolipoprotein F.	0.747
ENSMAMP00000009120	cetp	ENSMAMP00000009120	ENSMAMP00000020744	Uncharacterized protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.754
ENSMAMP00000009120	pltp	ENSMAMP00000009120	ENSMAMP00000013501	Uncharacterized protein.	Phospholipid transfer protein.	0.482
ENSMAMP00000009804	ENSMAMP00000004424	ENSMAMP00000009804	ENSMAMP00000004424	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSMAMP00000009804	ENSMAMP00000009120	ENSMAMP00000009804	ENSMAMP00000009120	Uncharacterized protein.	Uncharacterized protein.	0.917
ENSMAMP00000009804	LOC113126988	ENSMAMP00000009804	ENSMAMP00000008114	Uncharacterized protein.	Apolipoprotein Ea.	0.851
ENSMAMP00000009804	LOC113136485	ENSMAMP00000009804	ENSMAMP00000009861	Uncharacterized protein.	Uncharacterized protein.	0.575
ENSMAMP00000009804	cetp	ENSMAMP00000009804	ENSMAMP00000020744	Uncharacterized protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.784
ENSMAMP00000009804	lcat	ENSMAMP00000009804	ENSMAMP00000022460	Uncharacterized protein.	Lecithin-cholesterol acyltransferase.	0.975